Clupea harengus (Atlantic herring): 105912099
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Entry
105912099 CDS
T09045
Symbol
tspeara
Name
(RefSeq) thrombospondin-type laminin G domain and EAR repeat-containing protein isoform X1
KO
K24437
thrombospondin-type laminin G domain and EAR repeat-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105912099 (tspeara)
04990 Domain-containing proteins not elsewhere classified [BR:
char04990
]
105912099 (tspeara)
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105912099 (tspeara)
Domain-containing proteins not elsewhere classified [BR:
char04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
105912099 (tspeara)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPTP
Laminin_G_2
Laminin_G_1
Laminin_G_3
Peptidase_S3
Motif
Other DBs
NCBI-GeneID:
105912099
NCBI-ProteinID:
XP_031414883
Ensembl:
ENSCHAG00000023372
UniProt:
A0A6P8EFV1
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Position
21:complement(6885035..6898639)
Genome browser
AA seq
720 aa
AA seq
DB search
MDRRRACEVMGPQGLMLSLTLLLFLGDAALGAAPWRPCTEHGAPARLGRLVKGAAGSVVM
EEEEVTREGSHVEIKDSPASADLLPLDFLSRVLPQGGRPVKGVRLVQDGGARGVQFSSGP
QRALSFPSSQIFVNCQHFPAEFSVVVTMKVDRIAPKTSEYIFAMVREDGNLLLGLKFSKE
RLHLLYQGSEGRERLTFRRVQLANGHWHTLVLALSGHHATLTVDCGLPLELVQKKSFPAD
LNTGGSRIYVGNRKRWKGVFSGLLRQLVLIPGSDATPRICPSSNPRLAELAVPAVLGQLP
VVPPGNDVLLPPYESEVRVTLGSHLSCTGTEKGQLWFDTLKRGLFLCDGASWLPMLQERE
RLDYVDDHQDIFTSSETYDIEVFQVPSMGLFAAMAHHSSRPGSGIYRWTDGRFQLYQNIS
TCEAVAWKHFIVGRKVFLAVSNSKGLVEGAPEVSVIYKWSFKKLKFVRYQTLETYSARDW
EAFQINNESFLAVANHRKADGNHNINSVIYKWNPGTKAFEVNQTLLTSGAYDWEFFTIGP
YHFLAVANAFDGLSTYIDSTIYIWLRGTFQPFQTIRTLGATDWEMFRIGDRYFLAVANGH
MLYDRRPSLYAINSTIYELDMVTQMFITFQNIGTYSAVDWEFFTIGDEKFLVVANSYDGT
TYSLNSVIYRWQGYEGFIPVHRLPTIGCSDWEFFSSSEGSYLIYSSARQPLSKVFKLKTN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacagacggcgggcttgtgaagtgatgggacctcaggggctgatgctctcgctgacc
cttctgttgtttctgggagatgctgcactgggtgctgcgccatggagaccatgcacagag
catggcgctccggcccgcctaggtagactagttaaaggcgcggcaggatcagtagtgatg
gaggaggaagaggtgacgagggaaggaagtcatgtagagataaaggactctcctgcctca
gcagacctgctgcccctggacttcctgtcccgcgtgctcccgcaggggggccggcccgtc
aagggggtgcgcctggtgcaggacggaggggcgcgaggggtgcagttctcctccggccca
cagcgggccctcagcttcccctcctcgcagatcttcgtcaactgtcagcacttccccgcc
gagttctctgtcgtcgtgacgatgaaggtggatcgcatcgcaccaaagacgagtgagtac
atctttgccatggtgagggaggatggcaacctcctgctggggctgaagttctccaaggag
cgcctccacctcctctaccaggggtcagagggcagggagcgcctgaccttccggcgcgtg
cagctggccaatgggcactggcacacactggtgctggctctgagcgggcaccatgccacc
ctgacggtggactgtggcctgcctctggagctggttcagaagaagtcattccctgctgac
ctcaacacagggggctccagaatctatgtaggcaaccggaagcgctggaaaggagtattt
tctggtttactgcgtcagctggttctcatacccggctctgatgccaccccacggatctgc
ccctcctcaaaccccaggttggcagagctggccgtccctgcagtcctgggccagttaccc
gtggtgccaccagggaatgatgttcttttgcctccatacgagtcggaggtgcgggtcacc
ctggggtcacatctgtcttgtacggggacggagaaggggcagctctggtttgacaccctg
aagagaggcctcttcctatgtgatggagcctcatggctgcccatgctgcaagagcgggaa
cgtctagactatgtggacgatcaccaggacatcttcaccagctccgagacgtacgacatc
gaggtttttcaggtaccctccatgggtctgtttgctgccatggctcaccactccagcagg
cccggctcaggcatctacaggtggaccgacgggcgcttccaactctaccagaacatcagc
acctgtgaggccgtggcctggaagcacttcatcgtagggagaaaggtgttcttggccgtg
tcaaactcaaaaggactagtggaaggagcgccggaggtctccgtcatctacaagtggagc
tttaagaaactcaaatttgtgcgttaccagaccctggagacctacagtgcccgagactgg
gaggctttccagatcaacaatgagtcattcctggcagtggcaaatcacaggaaagcagat
ggaaaccacaacatcaacagtgtcatctacaagtggaatccaggtaccaaggcctttgag
gtgaaccagaccctcctgacctcaggggcctatgactgggagttcttcaccattggtcca
taccacttcctggcagtggcgaatgctttcgatggcctatccacttacatcgactccacc
atatacatctggcttagaggaacctttcagccttttcagactatacggacacttggggcg
acagactgggagatgttccgcattggagacaggtacttcctggccgtggccaatggacac
atgttatacgacagacgcccaagtctgtatgccattaactccaccatatatgagctggat
atggtcacacagatgttcatcacatttcagaacattggtacctacagtgctgtagattgg
gagttcttcactataggtgatgagaagtttctggttgtggctaactcatatgacggcaca
acctattcattaaacagtgttatatacaggtggcagggctacgagggcttcatcccggtc
caccggctccccaccattggatgcagcgactgggagttcttctcctcatcagagggctcc
tacctcatctactccagcgccagacagccactctccaaagtcttcaagctcaagacgaac
tga
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