Clupea harengus (Atlantic herring): 105912170
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Entry
105912170 CDS
T09045
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K23560
zinc finger homeobox protein 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105912170
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
105912170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
zf-C2H2_15
zf-C2H2_6
Tub_N
Zf-C2H2_ZNF451_2nd
TerY_C
Motif
Other DBs
NCBI-GeneID:
105912170
NCBI-ProteinID:
XP_042563647
Ensembl:
ENSCHAG00000014050
UniProt:
A0A8M1KIE3
LinkDB
All DBs
Position
5:7752335..7765860
Genome browser
AA seq
1127 aa
AA seq
DB search
MEAQDTAELQDKTTSLTPSEGTEPGSPARFARAHSLSPEPSPWAASGGGGGGGEGGALSG
ARRDGDKAPPAVYSRAEEEELAHYDFLAQLRKASHPGGLLESQTHNGSGAYHVRGVHDDT
PPPTCWSPGEHESPEDRGKAPCRWMDTAHLKCHFCADGHHCGRGAFPNRHSDIFDIPPMV
MNHNGVPLSPDALRGLLACPFCQRTYRREAALHEHIKFCHERDEGQSTCPICGFSAPYRA
QMERHMLLHSQAQEKPLSDTSMESRKFKCLQCGKAFKYKHHLKEHLRIHSGEKPYECTNC
KKRFSHSGSYSSHLSSKKCLNGGGAGSGGGGGGGGGGGGGAGPFNGHPHPAYLHSSPTSP
LTAGGRNSTVGKGSPYAQERQLGQLGQLPANHQPVPPQEQGVAGLRGRDLSRLWDPTAEL
SLRASVFKGTTLLPYLYSGSKFEHLLQEMLRREVQRQDGGPIREEERPGRGEARGSPERS
RHGEAPAPGGVTCPWCSQLFPNSAVLLQHERYLCKMNHRSEAAMEAADNPRAKDGSPLNF
SRPSPHRHSHPQEPQKTPTALSNGLPKEHSPLQRSPWQSVPQQLLVAMQSPMQLRPDTAL
PYWPHPEVGSPGGKTMVSPGAAATTGNTDIPFSPMQDRRRLLSSGFTSPLGLDLSTTGGS
PPSRSAAPCRTHGSAGSQSEPLDLSMPKAPAPEHQRERACNGTSRAERRDSEGLYRRLTP
PPQQLPGYGGAPPLQPGGPFGGAPMFGGSVYGAYPLFNPMIPAGLQGTGHESMPSLPVNR
AAPNAGFLSPMAYMLDSDTESVLKRIHQERQALMVSLAQTHSRTVKPLVSEALNRGCLDY
LSVVGEEGLDGDGGPGRKRLRKTEEGLYACDICDKTFQKSSSLLRHKYEHTGKRPHECKI
CKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYAYCSRDHDPDADG
LAEELSMGEEPRYQTPGLDLAPEQSTATTTTTNTTSTTTPEETSTFLSDSSLDGASGGLR
EEEEEEEEDEEDEEEERALGNYREELKADSEVGAEDLRGSPSPVLEAALKSQEEGGSRSN
RGGGGRAETNGEVNNHCDRNEEDAAMEQRWTPEKKNRSTDARCDDQA
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcaggacacggctgagctccaggacaagacgacaagcctgacgcccagcgag
ggcaccgagcctggcagcccggcccgcttcgcccgggcccacagcctcagccccgagcct
agcccctgggctgccagcggtggtggcggtggcggcggcgagggaggggccttgagtggc
gctcgcagggatggagacaaggcaccgccagcagtctacagtcgggccgaggaagaggag
ctggcccactacgacttcctggcccagctgaggaaggcctcccaccccggcggcctcctg
gagagccagacacacaatggcagcggcgcctaccacgtccgcggtgtccacgacgacacg
ccgccgcccacctgctggtcgcctggggaacatgagtcaccggaggatagaggtaaagcc
ccctgccgctggatggacacggctcacttgaaatgccatttctgcgctgatggccaccac
tgtggccgaggtgctttcccaaaccggcattctgacatctttgacatcccccctatggtc
atgaaccacaacggagtcccactgagccccgacgccctcagaggtctgctggcgtgcccg
ttctgccagcgcacctaccggcgcgaggcggcgctccacgagcacatcaagttctgccac
gagagggacgagggccagagcacgtgccccatctgcggcttcagcgcaccctacagggca
cagatggagaggcacatgctactgcacagccaggctcaggagaagcctctctctgacact
tctatggagagcagaaagttcaaatgcttgcagtgtgggaaagccttcaagtacaagcac
cacctcaaggagcacctcagaatccacagtggtgagaaaccgtatgaatgcacgaactgc
aagaagcgtttctctcactcaggttcctacagctctcatctcagcagcaagaagtgcctc
aacgggggaggagcaggatcaggaggaggaggaggaggaggaggaggaggaggaggagga
gcagggccctttaacggtcacccccacccagcctacctccactcctcccccacgtcaccc
cttacagctggaggtcgcaacagcaccgtagggaagggatctccatatgcccaggagagg
cagctggggcagctggggcagttaccagccaaccaccaaccagtccctccccaggagcag
ggcgtggccggcctccgaggccgggacctgagcaggctttgggaccctacagcggagctc
tccctcagggccagcgtcttcaaaggcaccaccctgctaccctacctctactccggtagc
aagtttgagcacctgctgcaggagatgctgaggagggaggtgcagcggcaggacggggga
cccatccgggaagaggagaggccaggccgaggagaagccaggggctcgccggagaggagc
aggcacggagaggctccggcgcctggaggggtgacgtgcccctggtgctctcagctcttc
ccgaacagcgccgtactgctgcagcacgagcgctacctctgcaagatgaaccaccgcagc
gaggcagctatggaggcggccgacaaccccagggccaaagatggctccccactcaacttc
tccaggccctctccgcatcggcattcacatccgcaagaaccccagaagacacccacagcc
ctcagcaatggcctccccaaagagcactcgccgctgcagcgcagcccctggcagtcagtg
ccccaacagctcctggtggccatgcagtctcccatgcagctccgccccgacaccgccctg
ccctactggccccacccagaggtcggcagccccggtggcaaaaccatggtcagtcctggc
gccgccgccaccaccggcaacactgacatccccttttcgcccatgcaagaccgcaggcgc
ctgctctcctcgggattcacctccccgctcggcctggacctctccaccacgggtgggtcc
ccccccagccgatctgccgcaccctgcagaacccacggctcggccggctcccagagtgag
cccctagatctgtccatgccgaaggccccggcaccagagcaccagagggagagggcctgt
aacggcacgtcgcgggccgagaggagagactcagaggggctgtacaggaggctgacacca
cccccgcagcagctgccggggtatgggggggctccgccactccaaccgggcggtcccttc
gggggagccccaatgttcgggggctccgtctacggagcctaccctctcttcaatcccatg
attcccgccggactccaaggcacggggcacgagagcatgccgtcgcttcctgtcaacagg
gcggcgcctaacgccggcttcctatcgccaatggcgtacatgctggactcggacacagag
tctgtcctgaagaggatccatcaggagaggcaggcgttaatggtgagtctcgcacaaaca
cacagtcgtacagtcaaaccgctcgtcagcgaggccttgaaccgcggctgcctcgactac
ctctctgtggtgggggaggaggggctggatggagacggaggcccggggcgcaagaggctg
aggaagacggaggagggcctgtacgcctgcgacatctgcgacaagacattccagaaaagc
agctcgctgctacgtcacaagtatgagcacacagggaaacgtccccacgagtgcaagatc
tgcaagaaggccttcaagcacaagcaccacttaatcgagcacagccgcctacactctggc
gagaaaccctaccagtgtgacaagtgtggcaagcgcttctcgcactctggctcctactcc
cagcacatgaaccaccgctacgcctactgcagccgggaccacgacccagacgccgacggc
ctggctgaggagttgtccatgggggaagagcctcgctaccagaccccgggcctggacctc
gctcctgagcagagcacagcgaccaccaccaccaccaacaccacctccacgacgactcca
gaggagacttccaccttcctcagcgactccagcctggacggagcctctggagggctcagg
gaggaggaggaggaggaggaggaggatgaggaagacgaggaggaggaacgggcactgggt
aactatagagaggaactgaaggcagactctgaggttggggctgaagatctccgagggagc
cccagccccgtactagaggcggcactgaagagccaggaggagggcggcagcaggtcgaac
agaggtgggggagggagggccgagacgaacggggaggtgaataaccactgtgaccgaaat
gaagaggatgcagcgatggagcagagatggacaccggagaaaaagaatcgcagcacagat
gccagatgtgatgaccaggcatga
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