Clupea harengus (Atlantic herring): 105912183
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Entry
105912183 CDS
T09045
Symbol
magi1b
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1b isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105912183 (magi1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
Motif
Other DBs
NCBI-GeneID:
105912183
NCBI-ProteinID:
XP_031423329
Ensembl:
ENSCHAG00000025769
UniProt:
A0A6P8FCX7
LinkDB
All DBs
Position
5:6152114..6276161
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AA seq
1692 aa
AA seq
DB search
MSKVIQKKNHWTTKVNECAVYKDVRGELNAELFGGAENGEFAYIGQVNENAVVYKNGKLI
EGELLLEVETLPVSGLPLYDVLTVIKNCKGPIRLKTVRQGNKLNKDLKRYLSQRFQKSSP
DHELQQIIRDNLYRHAVPCTTRSPRDGEVPGVDYNFLPVEEFLKLEQSGTLLEIGSYDGN
YYGTPKPPIQPPSGKVITSDALQDCLPGSEQSTPRRTKSYNEMQNAGIVPADVEDDDEAP
EMNSSFTGDSSEPDEHTSVRPYATRDNVPSSAPSSAPSSTTDGPPQPHPQPHHPPEEDPL
GPIPDNWEMAYTENGEVYFIDHNTKTTSWIDPRCLDKPPKPLEECEDDEGVHTEELDNEL
ELPTGWEKIEDPVYGVYYVDHINRKTQYENPILEAKRKKQFEQQQQQQPPEGERYTREWI
EDHSSAGNPPASYAAHHQETYRDPPPPGPPPPIGAKRGKPFFTRNPAELKGTFINTKLKK
SRRGFGFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTIVLGYTHAQVVK
IFQSIPIGSMVDLELCRGYPLPFDPDDPNTSLVTSVAIIDKEPIIVNGQESYDSPSSHGS
QGGSHSGSSANVGGSMGGINGVREPRSHSPSAEVASNGSHGYPNDQVTLASSIATQPELI
TVHMEKGDKGFGFTIADSPSGGGQRVKQIVDYPRCRGLREGDIIVEVNKRNVQNLSHNQV
VDILSKCPKGSEVTMLVQRGVAPAKKSPKLQQLERKDSQGSSQHSASSHRSVHTESPAHA
SQALATETAAAAPPPPHAQPLPGLPPQEPPADGTIQKKPDPFKIWAQSRSMYESRLPDSQ
EQDIFLWRKDTGFGFRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVG
KSHQLVVQLMQQAAKQGHVNLTVRRKTGFGVAKVDGEVPPSPASSHHSSNHAPSLTEEKR
TPQGSQNSLNTVSSGSGSTSGIGSGGGAGGPGTAVVNTAVQPYDVEIRRGESEGFGFVIV
SSVSRPEAGTTFAGNACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNSCSITNKSHSD
IVNLIKEAGNTVTLRIIPGDESSNASLLTNAEKIATITTTHTPQQQAAPEPRNNTKPKQE
SYEFKAPQAPPPPAPNQAPPQDAEFYSVDLERDSKGFGFSLRGGREYNMDLYVLRLAEDG
AAVRNGKMRVGDEILEINGESTKGMKHARAIELIKNGGRRVHLVLKRGDGSVPEYAPGSG
PGTSAQNFPEVSGAPTDSQINPSSGSSYPQDFHEPSQNDEDKRAREPGKKKKEPGRSTNN
HHSKSRHRSPDKKSKSKGKSKSKSKSAESGATRLFKRKGDKTKSGTENSHSHQQHRGTHH
HHQHHHSSSHNRRHRSPERSRRARSAENTLDSRHGRSRGRSPGRHHHRHTSPRRYKSPQR
GRSPYRSPQRRSSPHRSPQRRSSPPRYRYQSPNRYQSPNRYRSRSVDPYAERVANTKPEK
EEEVALREPPPPAPPSRTESVLTEAGARERLNRGDTLQRDASSLLRGPSSMDRAYRGDSL
LTDSGRRDAIERAYREAVERERDQAAQTLPRVQTPNSSYNRYSTLLRGRSPEREDHLGNG
NGNATLGNRYRTRSLGRDLSPERSYVNEEEEEDESDFPDYYRVPRPDYGRVSNTLPEPKR
NTHKDNPKDLSI
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtgatccaaaagaagaatcactggaccaccaaagtaaacgaatgcgccgtc
tataaagacgtccgcggtgagctgaatgccgagctgttcggtggagcggagaatggagag
tttgcctacataggacaagttaacgaaaatgcggtggtttacaagaatggcaaattaatc
gaaggggaattactattggaagttgagacgcttcctgtctccggcttgccgctgtatgac
gttctgactgtgataaagaattgcaaaggaccgatcagattgaaaacagtcagacaagga
aacaagctcaacaaggacctgaaacgctatctgagccagaggttccaaaagtcttccccg
gatcatgaacttcagcagatcatccgagataacctgtatcgccatgctgtgccttgtaca
acccgctccccacgtgacggagaggtccctggagtagattacaacttcctgcctgtggag
gaattcctgaagcttgaacaaagtgggaccctgctggagattggatcatatgacggtaac
tattatggaacacccaagccgccgatccagccccctagcgggaaagtgattaccagtgat
gctctgcaagactgcctgcccggctccgagcaatccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgccgacgtagaggacgatgacgaggctcct
gaaatgaacagtagctttacaggagactccagtgaacctgacgagcacacctccgtgcga
ccctacgccacccgcgacaacgttccctcctccgcgcccagcagcgctccgtcgtcaacc
acggacggcccgccgcagccccacccacagccccaccatcctcccgaggaggacccgctg
ggcccaatccccgacaattgggagatggcctacacggagaatggggaggtctacttcata
gatcataacacaaagacgacatcctggatcgacccccgctgcctggataagccaccgaag
cccttggaagaatgtgaagatgatgaaggggttcatacagaagagttggacaatgagcta
gagctgccaacaggatgggagaaaattgaggatcctgtctacggggtttattatgtggat
cacataaacaggaagacgcagtatgagaaccccatcctggaggccaagcgcaagaagcag
tttgagcagcagcagcagcagcagccacctgaaggtgagcgctacactcgagaatggata
gaggaccactcgtctgctggcaacccccctgccagttacgccgctcaccaccaagagacc
taccgggaccctccgccgcctggccctccaccccccattggggcaaaaagaggtaagcct
ttctttacgcgcaacccggcggagctgaaagggaccttcatcaacaccaagctgaagaag
agtcgcagaggctttgggttcaccgtggtagggggtgacgagccggacgagttcctgcag
atcaagagcctggttctagacgggcctgctgccctggatgggaagatggagaccggtgac
gtgatagtcagtgtgaatgacaccatcgtcctgggctatactcatgcccaggtggtgaag
atcttccagtctattcccatcggctccatggtggacctcgagctctgccgcggctaccca
ctcccctttgaccctgatgaccccaacaccagcctggtgacctccgtggccatcattgac
aaggagcccatcatagtgaatgggcaagagagctacgactccccgtcgagccacggcagt
caaggcggtagccacagtggcagtagtgccaatgtcgggggcagtatggggggcatcaac
ggcgtacgggagccccggtcccacagtccctcggccgaggtggcctccaacggttcacac
ggctacccaaatgaccaggtgacgctagcttcgtccatcgccacgcagcccgagctcatc
accgtgcacatggaaaagggcgacaagggcttcggcttcaccattgccgacagcccttcg
ggaggcggccagcgcgtcaagcagatcgtggactacccacgatgccgcgggctgagggag
ggtgacatcatcgtggaggtgaacaagaggaatgtgcagaacctgtcgcacaaccaggtg
gtggacatactcagcaagtgccccaaaggaagcgaagttaccatgttggttcagagaggg
gtggcacctgcaaagaagagccccaaactgcagcagttggagcgtaaggacagccagggc
agctctcagcacagcgcctccagccaccgcagcgtgcacaccgagtcgcccgctcacgcc
tcgcaggccctggccaccgagacggccgccgccgccccgccgcccccccatgcccagccg
ctgcccggcctgcccccccaggagccgccggcagacggaaccatccagaagaagccggac
cccttcaagatctgggcccagtccaggagcatgtatgaaagtaggctgccggattctcag
gagcaggatatcttcctgtggaggaaggacacaggcttcgggttcaggatcttgggagga
aatgaaccaggagaaccgatctacatcggccatatcgtgaagtacggggcggccgacgag
gatggccggctgcgctccggggacgagctgatctgcgtggacggtaccgccgtggtgggg
aagtcccatcagctggtagtgcagctgatgcaacaggcagccaagcagggccacgtcaac
ctgacagtgaggcgcaagactggtttcggagtggccaaagtcgatggggaggtgcctccg
tcccccgcctcgtcccaccacagcagcaaccacgccccctcgctaaccgaggagaagcgc
acgccacagggctcccagaattccctgaacacggtgagctccggctcgggcagcaccagc
ggcatcggcagcggcggcggcgcaggagggcccggcactgctgtggtcaacacggccgtg
cagccgtacgacgtcgagatccgccgcggagagagcgagggcttcggctttgtcatcgtc
tcatccgtctcgaggcccgaggcaggcaccacctttgctggaaacgcgtgtgtcgccatg
ccccacaaaatagggcgcatcatcgagggcagtccggcggaccgctgcggcaagctgaag
gtgggcgaccgcatcctggccgtcaacagctgctccatcaccaacaagtcccactccgac
atcgtcaacttgatcaaggaggccggcaacacagtcacgctccggatcatcccaggtgac
gagtcctctaatgcgtcactgctgaccaacgcagagaagatcgccaccatcaccaccaca
cacacgcctcagcagcaagctgcacctgagcccaggaacaacacaaaaccaaaacaggag
tcgtatgagttcaaagccccccaggctcctcctccaccggctcccaaccaggcccctcct
caggacgcagagttctactcggtggacctggagcgcgacagtaaaggctttggcttcagc
ctgcgcggcgggcgcgagtacaacatggacctgtacgtcctaaggctggccgaggacggc
gcggcagtccgcaacgggaagatgagggtgggcgacgagatcctggagatcaatggcgag
agcaccaaggggatgaagcacgcccgcgccatcgaactgatcaaaaacggagggcggcgg
gtgcacctggtactcaagcgaggcgacggctccgtgccggaatatgcccccggcagcggc
cccggtaccagcgcccaaaactttccggaagtgagcggtgcacctaccgacagtcagata
aacccatcatcggggtccagctatccacaagactttcacgaaccatcccagaacgacgag
gacaagcgggccagggagcccggcaagaagaagaaggagcccggccggagcaccaacaac
caccattccaaaagccgccaccgctcgcccgacaagaagagcaagagcaaaggcaagagc
aagagcaagagcaagtcggcggaaagcggcgccacccggctgttcaagaggaaaggcgac
aagacgaagtccggcactgagaactcccacagtcaccaacaacacagaggcactcaccat
caccatcaacaccaccacagcagcagccacaaccggaggcaccgttcaccggagaggagc
cgccgtgcccgcagcgcagaaaacaccctggacagccgccacggtcgtagccgtggccgc
tcacctggcagacaccaccaccgtcacacctcaccccgccgctacaagtctccccagcgg
ggccgctccccttacaggtcccctcaacgccgtagctccccgcatcgctccccccaacgg
cgcagctcgcccccccgctacaggtaccagtcccccaacaggtaccagtcccccaacagg
taccgctcccgctccgtggacccctacgccgagagggtggccaacaccaagccagagaag
gaggaggaggtggcactgagggagcctccgccgcccgcacccccctccagaacggagagc
gtcctgacggaggcgggcgctcgggagcgtctgaaccgcggggacaccctgcagcgagac
gcctccagcctcctgcgggggccctcgtccatggatcgcgcctaccggggagacagcctc
ctcacggattccggcaggagagacgccatcgagagggcctaccgagaggccgtggagcgc
gagcgggatcaggcagcacagactctgcccagggtccagacgcccaactcgtcctacaac
cgctacagcacgctgctgcggggccgctccccggagagagaggaccatctcggcaatggc
aacggcaacgcaaccctcggtaaccgctacagaacccgcagcttgggaagggatctgtct
ccggagcggagctatgtgaacgaggaggaggaggaggacgagagcgattttccagactac
tacagggtgcctaggcccgactacggccgtgtgtccaacacgctgccagagccaaaacgc
aacacccacaaagacaaccccaaagacctcagcatctga
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