KEGG   Clupea harengus (Atlantic herring): 105912193
Entry
105912193         CDS       T09045                                 
Name
(RefSeq) tubulin alpha chain-like
  KO
K07374  tubulin alpha
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04145  Phagosome
char04210  Apoptosis
char04517  IgSF CAM signaling
char04530  Tight junction
char04540  Gap junction
char04814  Motor proteins
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    105912193
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    105912193
  09143 Cell growth and death
   04210 Apoptosis
    105912193
  09144 Cellular community - eukaryotes
   04530 Tight junction
    105912193
   04540 Gap junction
    105912193
  09142 Cell motility
   04814 Motor proteins
    105912193
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105912193
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105912193
   03036 Chromosome and associated proteins [BR:char03036]
    105912193
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:char04812]
    105912193
   04147 Exosome [BR:char04147]
    105912193
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     105912193
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     105912193
Cytoskeleton proteins [BR:char04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    105912193
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105912193
  Exosomal proteins of other body fluids (saliva and urine)
   105912193
  Exosomal proteins of colorectal cancer cells
   105912193
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 105912193
NCBI-ProteinID: XP_012696570
Ensembl: ENSCHAG00000018544
UniProt: A0A6P3WE80
LinkDB
Position
5:5088150..5090836
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctccatacatgttggccaggctggagtgcagatcggcaatgcctgc
tgggagctgtactgtctggagcatggcatccagccggacgggcagatgcccagtgacaag
gccattggaggaggagacgactccttcaacaccttcttcagtgagaccggagccggcaag
cacgtccccagggctgtgtttgtagatctggagcccacagtcattgatgaggtgcgctct
ggcacctaccgccagctgttccaccctgagcagctgatcactggaaaggaggatgctgcc
aacaactacgcccgtgggcattacactattggcaaggaaatcattgatctggttctggac
aggatccgcaaactgtctgaccagtgcactggacttcagggtttcctggtcttccacagc
ttcggaggtggcaccggctctggtttcacctccctgctgatggagcgcctctctgtcgac
tttggcaagaagtccaagcttgagttctccatttacccagctccccaggtgtccactgca
gtggtggagccttacaacgccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgtaggaacctcgacattgag
cgtcctagttacaccaaccttaacaggttgattggccagattgtgtcctccatcactgcc
tccctccgttttgatggtgctctgaatgttgatctgactgaattccagaccaacttggtg
ccctaccctcgtatccacttccccctggctacatatgccccagtaatctctgctgagaag
gcctaccatgagcagctctcagtgtctgagatcactaatgcttgctttgagcctgccaat
cagatggtcaaatgcgacccccgtcacggcaagtacatggcctgctgcctgctgtaccgt
ggtgatgttgtaccaaaagatgtcaatgcggccattgccaccatcaagaccaagcgctcc
atccagtttgtggactggtgccccactggttttaaggtgggcattaactaccagccccct
actgcggtacctggtggtgacctggccaaggtgcagagggctgtttgcatgctgagcaac
accactgctattgcagaggcttgggccaggcttgaccacaagtttgacctgatgtacgcc
aagcgtgcctttgtgcactggtacgtaggtgagggtatggaggaaggtgagttctcagag
gccagagaggacatggccgccctggagaaggattatgaggaggtcggtgtcgactccatt
gagggtgagggagaggaagagggagaggagtattaa

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