Clupea harengus (Atlantic herring): 105912193
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Entry
105912193 CDS
T09045
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
char04210
Apoptosis
char04517
IgSF CAM signaling
char04530
Tight junction
char04540
Gap junction
char04814
Motor proteins
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105912193
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
105912193
09143 Cell growth and death
04210 Apoptosis
105912193
09144 Cellular community - eukaryotes
04530 Tight junction
105912193
04540 Gap junction
105912193
09142 Cell motility
04814 Motor proteins
105912193
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105912193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105912193
03036 Chromosome and associated proteins [BR:
char03036
]
105912193
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105912193
04147 Exosome [BR:
char04147
]
105912193
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105912193
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
105912193
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
105912193
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105912193
Exosomal proteins of other body fluids (saliva and urine)
105912193
Exosomal proteins of colorectal cancer cells
105912193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
105912193
NCBI-ProteinID:
XP_012696570
Ensembl:
ENSCHAG00000018544
UniProt:
A0A6P3WE80
LinkDB
All DBs
Position
5:5088150..5090836
Genome browser
AA seq
451 aa
AA seq
DB search
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVSEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TAVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSIEGEGEEEGEEY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccatacatgttggccaggctggagtgcagatcggcaatgcctgc
tgggagctgtactgtctggagcatggcatccagccggacgggcagatgcccagtgacaag
gccattggaggaggagacgactccttcaacaccttcttcagtgagaccggagccggcaag
cacgtccccagggctgtgtttgtagatctggagcccacagtcattgatgaggtgcgctct
ggcacctaccgccagctgttccaccctgagcagctgatcactggaaaggaggatgctgcc
aacaactacgcccgtgggcattacactattggcaaggaaatcattgatctggttctggac
aggatccgcaaactgtctgaccagtgcactggacttcagggtttcctggtcttccacagc
ttcggaggtggcaccggctctggtttcacctccctgctgatggagcgcctctctgtcgac
tttggcaagaagtccaagcttgagttctccatttacccagctccccaggtgtccactgca
gtggtggagccttacaacgccatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgccgtaggaacctcgacattgag
cgtcctagttacaccaaccttaacaggttgattggccagattgtgtcctccatcactgcc
tccctccgttttgatggtgctctgaatgttgatctgactgaattccagaccaacttggtg
ccctaccctcgtatccacttccccctggctacatatgccccagtaatctctgctgagaag
gcctaccatgagcagctctcagtgtctgagatcactaatgcttgctttgagcctgccaat
cagatggtcaaatgcgacccccgtcacggcaagtacatggcctgctgcctgctgtaccgt
ggtgatgttgtaccaaaagatgtcaatgcggccattgccaccatcaagaccaagcgctcc
atccagtttgtggactggtgccccactggttttaaggtgggcattaactaccagccccct
actgcggtacctggtggtgacctggccaaggtgcagagggctgtttgcatgctgagcaac
accactgctattgcagaggcttgggccaggcttgaccacaagtttgacctgatgtacgcc
aagcgtgcctttgtgcactggtacgtaggtgagggtatggaggaaggtgagttctcagag
gccagagaggacatggccgccctggagaaggattatgaggaggtcggtgtcgactccatt
gagggtgagggagaggaagagggagaggagtattaa
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