Clupea harengus (Atlantic herring): 105912225
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Entry
105912225 CDS
T09045
Symbol
si:dkeyp-97e7.9
Name
(RefSeq) DEP domain-containing mTOR-interacting protein
KO
K20402
DEP domain-containing mTOR-interacting protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04140
Autophagy - animal
char04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
105912225 (si:dkeyp-97e7.9)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105912225 (si:dkeyp-97e7.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105912225 (si:dkeyp-97e7.9)
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
105912225 (si:dkeyp-97e7.9)
mTORC2 complex
105912225 (si:dkeyp-97e7.9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEP
PDZ_6
PDZ_2
PDZ
Motif
Other DBs
NCBI-GeneID:
105912225
NCBI-ProteinID:
XP_012696603
Ensembl:
ENSCHAG00000002335
UniProt:
A0A6P3WEG0
LinkDB
All DBs
Position
5:complement(4270506..4276128)
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AA seq
401 aa
AA seq
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MERIGSVNKKVMARQHKAEVMIAGEQLRLRLHDGKLIKDRRYHLRTYPNCFVAEELIDWL
VSHKEAPNRQVALELMQHLIDHDIVHHVCDKSPMFKDAKLLYRFRKDDGTFPFNIEVKVF
MRGQGLYEHLISSKDSILQLREERGVAYQRSFPGCQLIDWLLQNGEVPSRRQGLELCRAL
LEHGILQHVSLKHHFFDSGLLYQFCINFRRRRRLAELLSENERDEEGVAPQTQEEHPESP
FVLRKNPPAEGNTTFLSVQPSELKVASGARWSSLPNQQVTGSYSNSNSLSSGPVVMCNPK
SVLGKNICCEELLSPGAPFTRRVLTVLGDALGWGFVVRGRSPCYVQAVDPSSPAAAAGVK
VRQFVCQVNGCSVLHLDYRTLRKLVMTGPRTVVLEVMEPID
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaattggaagcgttaacaaaaaagtaatggccagacaacacaaggctgaagtt
atgattgctggtgaacaactcaggttacgactgcatgatggcaaattgataaaggatcgc
aggtaccacctgcgtacctacccaaactgctttgtagcagaagagctcattgactggctg
gtaagccacaaagaggcaccaaatcgtcaagtggctctcgagctaatgcagcatttaata
gaccatgacatcgtgcaccacgtgtgtgacaagagccccatgttcaaggatgccaaactg
ttgtaccgctttaggaaggatgatggcacttttccctttaacattgaagtgaaggtcttc
atgcgtgggcagggtctttatgagcatctcatcagcagcaaggactccattctccaactg
cgggaggagagaggggtggcgtaccagcgctctttccccggctgccagctcattgactgg
ctgctgcagaacggagaggtgccaagccggagacaggggctggagctgtgcagagccctg
ctagagcatggcatccttcagcatgtctctctgaagcaccacttctttgacagtgggctc
ctgtatcagttctgtattaacttccgccgccggcgccggctcgctgagctgctgagcgag
aatgagcgtgacgaggagggtgtggctccacagacgcaggaggaacatcctgaaagcccc
ttcgtcctgcgcaagaaccctcctgcagagggaaataccaccttcttgtcagttcagccc
tctgaactgaaggttgcatctggagcacggtggagcagtctgccaaatcaacaagtaacc
ggcagttacagtaactccaactccctctcctcaggacctgtggtgatgtgcaaccccaaa
tcagtgctggggaaaaacatctgctgtgaggaactgttgtcccctggtgctcctttcacc
aggagagttttaacggtgttgggagatgctttgggctggggttttgtggttaggggaaga
tcaccgtgttatgtgcaagctgtggatcccagcagccctgcagcagcagctggggtgaag
gtgcgtcagtttgtctgccaggtgaatgggtgcagtgtactccatctggattaccgtaca
ctgagaaagcttgtgatgaccgggccacgcactgttgtacttgaagtgatggagccaatc
gattaa
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