Clupea harengus (Atlantic herring): 105912231
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Entry
105912231 CDS
T09045
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00510
N-Glycan biosynthesis
char00513
Various types of N-glycan biosynthesis
char01100
Metabolic pathways
char04141
Protein processing in endoplasmic reticulum
Module
char_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
105912231 (rpn1)
00513 Various types of N-glycan biosynthesis
105912231 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105912231 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
105912231
NCBI-ProteinID:
XP_031423310
Ensembl:
ENSCHAG00000021734
UniProt:
A0A6P8FIE1
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Position
5:5411761..5421054
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AA seq
602 aa
AA seq
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MFRKRMYSSVATYILLICGLYRAVAATGLVNDEVKRTVDLSTHLAKISAEILLSNEGDSA
VNSFVVALEPELASHLAYIGASVKGDEEDDGHLELSETVLPGQSGKFFKVELPSSLAAGS
KLRVKVETMLSHVLRPFPTQITQAEKQLVVFQGNHYMYSPYPSRSQTTRVRLASKTVETY
TRLGNPSKLDEVIEYGPFRDVAPFSQDTMKIHYENNTPFLTISSITRTIEVSHWGNIAVE
ETIDLRHTGAYLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHL
QILEDSVEVEVRPRFPLFGGWKTHYMVGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVI
DFLTVKLILPEGARNVHMETPYPVSRDSDQLHYTYLDTFGRPVLVATKSNLVEQHIQDMV
VHYNFNKILMLQEPLLVVGAFYILFFTVIIYVRLDFSITKDPAAEVRMKVASITEQVLTL
VNKRLGLYRHMDEVVNRYKQTRDSGALNGGRKTLEADHRTLTNDINSLQARLKAEGSDLA
EKVGEVQKLDGQVKDLVCRSCQEAERLVAGKVKKEAYIENEKGLASKRQDLVSRIDSLLD
AL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtaaaagaatgtattcatccgtggccacatatattctgctaatttgtggacta
tatcgtgcagtggcagccaccggtttggtcaatgatgaagtgaaacgcacagtggacttg
agtacgcaccttgctaagatttctgccgagatccttttgtcaaatgaaggagattctgca
gtcaacagctttgttgtggcccttgaacccgaactagcttcacatctggcctatattggc
gcatcggtgaaaggggatgaagaggatgatggacatctggagttgtcagagactgtcctg
cctggtcagagtggcaagttttttaaggtggagttgccctcttcactggcagcaggcagt
aagctccgtgtgaaggtggagacgatgcttagccatgtgctgcgtcccttccccacccaa
atcacccaggccgagaagcagctggtggttttccagggcaaccactacatgtattccccc
taccccagccgttcccagaccactcgtgtcaggctggcctcgaagaccgtggaaacctac
accaggctgggtaaccccagcaagttagacgaggtcattgagtatgggcctttccgcgat
gttgctcctttcagccaggacaccatgaagatccattatgagaacaacacccctttcctg
accatcagcagtattacccgcaccatcgaggtgtcccactggggcaacatcgctgtggag
gagaccattgacctaaggcacactggcgcttacctgaagggacccttctcccgctatgac
taccagaggcagtcagacagcggaatctcctctgtcaagtctttcaagaccatccttcct
gcttcagctcaggatgtgtactaccgggatgagatcggcaacatctccacctcacacctc
cagattctggaagattctgtggaggttgaggtgaggccccgctttcctctgttcggaggc
tggaagacccactacatggttggctacaacttgcccagctacgagtacctttacacttta
ggtgaccagtatgccctgaagatgcgtcttgtggatcatgtctatgatgaccaggtgatc
gattttctgactgtgaagctcattctcccagagggtgcaagaaatgtccacatggaaaca
ccttaccccgtcagtcgggactccgaccagctgcactacacttacctggacacctttggc
cggcccgtgctggtggccaccaagagcaacctggtggaacagcacatccaggacatggtg
gtgcattacaacttcaataagatcctcatgctgcaagagcctctgctggtggtgggagca
ttctacatcctcttcttcactgtcatcatctatgtgcgcctcgacttctccatcacgaag
gatcctgctgcagaggtgcgtatgaaggttgcctccatcacagagcaggtgctgaccctg
gtgaacaagcgtctgggcctgtaccggcacatggatgaggtggtgaaccgctacaagcag
acccgggacagcggggcactcaacggcggccggaagaccctggaggccgaccaccgcacc
ctcaccaatgacatcaactccctgcaagctaggctcaaagccgagggctctgacttagct
gaaaaggtgggcgaggtgcagaagctggacggccaggtgaaggacctggtgtgccgctcg
tgccaggaggcggagcgcctggtggcgggcaaggtgaagaaggaggcctacattgagaac
gagaaaggcctggccagcaagcgacaagacctggtgtcccgcatcgacagcctcctggac
gccctgtaa
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