Clupea harengus (Atlantic herring): 105912234
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Entry
105912234 CDS
T09045
Symbol
cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105912234 (cpne1)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105912234 (cpne1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
105912234
NCBI-ProteinID:
XP_012696616
Ensembl:
ENSCHAG00000015841
UniProt:
A0A6P3WEH8
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Position
5:complement(4818497..4837502)
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AA seq
884 aa
AA seq
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MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGEHGEAFIVFATDEDARLGMMRT
GGSIKGSKVSLLLSSKTEMQNMIELSRRRFEAGSVEGAAGNGNRPGPPATSGGSGRGSMP
TSGQGFSNTSTSATTAVSAHEPVSIKNVSTFAPTSMGNMPSFNNNFSSPSITTMGSTMTT
AMSSLNSVPPPIPPLPSMQSLPPMPSMPPLPGPPPVSSHPSVQTVSPLSAVPPVPPMSHM
PHLSAMPPFNPGVPPPGGPGLATSGPPMSLGSPNHMFLNPMNLNPLNLQAHLKPSITNPD
EYFVHLQGLPFTANELEVREFFHGLGVENVRVLRDNMGRSSGRALVKFFAPQDAYEAIKR
NSAMLGQRYVEISPATERQWRECGGGFLGQNQSKPGHNADQDRHRRGSSSSASPSGRERA
RSRSPHRQEFCVYLKGLPYEAENKQIFEFFKNLDIVEDSIYIAYGPNGRATGEGFVEFRN
EMDYKAALGCHMQYMGSRFIQVHPITKKAMFEKIDSIRKRMQGTQGDQKSSSTEGGKNPR
NCAHVSNIPYNVSKKDVRLFLNGIQLFEDTLKVLADTNGNGLGQAVVQFKSEEEALKAER
LHRQKLNGRDAFVHLVTFDQMKEIERNPPPQSRRGQKSQGNVHSHAQGQGQVQAQAHVHA
YPAMSGEEFNFLRNSVGNLNNGPPFVAQFSAPGNGLAGPPPLPPLGSTLGDVTLGVPPPL
VGAHLPGQVLEPPGFRPGPGSNGPPGFVGGPESLRGIPPFDNGSRKGGNHNRGGQQGPTG
GPQPSFGSASDNLRGPSGGGGPSNPRPTIVKIQNMPFTVTVDEILDFFYGYQVLPGSVCL
QFSEKGLPTGEAMVAFESHDEAMSAVMDLNERPIGARKVKLTLG
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgcttgcagggtctccccattgtggcagggaccatggacattcgc
catttcttctctggattgaccatcccggatggtggggtgcatattgtagggggtgaacat
ggcgaagcatttattgttttcgccacagacgaagatgccaggcttggtatgatgcgaaca
ggggggtccatcaaaggttctaaggtatcattgttgctgagcagcaagacggaaatgcag
aacatgattgagcttagccgcaggcggtttgaagctggcagtgtagagggagctgcagga
aacggtaacagaccaggccctcctgccacctctggtggaagtgggagaggtagcatgccc
acttctggtcaaggtttcagtaatacatcaacttctgccactacagctgtttctgcacac
gagccagttagcatcaaaaatgtgtctacctttgcccccactagcatgggcaacatgccc
agtttcaacaataacttcagtagccccagcatcacgacgatgggttccaccatgacaact
gccatgtcctccctaaactctgtaccaccacccataccacccttaccctccatgcaatct
ttaccacccatgccttcaatgccacccttgccaggtcccccacctgtatcatcccatccc
tcagtgcaaacagtttcccctttgtctgcggtgccacctgtccctccgatgtctcatatg
ccccacctgtctgcaatgcctccttttaatccgggtgtccctcccccaggtggacctggt
ctggctacatctggaccgcctatgtccctgggaagccccaaccacatgttccttaacccc
atgaaccttaacccccttaatctccaggctcacttgaagccatcaattaccaaccctgat
gagtatttcgttcacctgcaaggcctgccctttactgcaaacgagttagaagtaagagaa
ttctttcatggattgggtgttgaaaatgttcgtgtccttagagataacatgggcaggagc
agcggtcgagcattagttaaattctttgcgccccaggatgcttatgaggcaataaaaaga
aactcggcaatgctagggcaaaggtatgtggagatatccccagcaacagagaggcagtgg
cgagagtgtggcggtggatttcttggccaaaaccagtccaaacctggtcataacgcagac
caggaccgccatcgccgtggaagttcaagttctgcgtctccttcaggacgtgaacgtgca
aggtccaggtctccacataggcaagagttttgtgtctatctgaaagggcttccatatgaa
gctgaaaacaaacagatatttgaatttttcaaaaacctggacattgttgaagacagcatt
tacattgcttatggacctaacggtagagcaacaggggaaggttttgtagagttcagaaat
gagatggactacaaagctgcccttggctgccatatgcagtacatgggtagtcgattcata
caggtccaccccatcactaagaaggcgatgtttgaaaagatcgattccattcgcaaaagg
atgcagggtacccaaggtgatcagaaaagtagttccacagagggaggaaaaaacccaagg
aattgtgcccacgtttcaaatatcccatacaatgtgtccaagaaagatgtacgtctcttc
ttgaatggaattcagttatttgaggataccttaaaagttctagctgacactaatggcaat
ggccttggccaagcagtagtgcaatttaaatctgaagaagaagcacttaaagcagaaagg
ttgcatagacaaaagcttaatggcagagatgcctttgttcatttggtcacatttgaccag
atgaaagaaatagaaagaaacccaccacctcagtccaggaggggtcagaaatctcaaggt
aatgtccattcacacgcacaagggcagggccaggttcaagcgcaggcccatgtgcacgct
tatcctgccatgagtggggaggagttcaacttcctcagaaacagtgtaggaaacctaaac
aacggccctccttttgttgctcagttcagtgccccaggcaatggccttgctggcccccct
cccttgccacctcttggttccacgctgggagacgtcacacttggtgtgccaccaccattg
gtcggtgctcacttgcccggacaagttcttgagccgccagggttccgcccaggaccaggt
agcaatggacctcctggttttgtgggtggcccagagagtctgagaggtatcccacctttc
gataatgggtctaggaaagggggcaaccacaacagaggagggcaacaaggccccactggg
ggccctcaaccttcctttgggtccgcctctgacaatctgagagggccatctgggggtggt
ggccccagtaaccctcggcccaccattgtcaagattcagaatatgccctttacagttaca
gtagatgagatacttgattttttctatggctatcaagtgctgcctggttctgtatgcctt
cagttcagtgaaaaagggctgccaactggcgaggcgatggttgcatttgagtcccacgat
gaggctatgtctgcagtcatggatttgaatgaaagacccattggagcaaggaaagtgaag
ttaactttgggatag
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