Clupea harengus (Atlantic herring): 105912249 Help Entry 105912249         CDS       T09045                                  Symbol hcfc1a Name (RefSeq) host cell factor 1a isoform X4   KO K14966   host cell factor 1 Organism char  Clupea harengus (Atlantic herring) Pathway char03083   Polycomb repressive complex char04980   Cobalamin transport and metabolism char05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:char00001]  09120 Genetic Information Processing   09126 Chromosome    03083 Polycomb repressive complex     105912249 (hcfc1a)  09150 Organismal Systems   09154 Digestive system    04980 Cobalamin transport and metabolism     105912249 (hcfc1a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     105912249 (hcfc1a)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:char01009]     105912249 (hcfc1a)   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:char03036]     105912249 (hcfc1a)    03029 Mitochondrial biogenesis [BR:char03029]     105912249 (hcfc1a) Protein phosphatases and associated proteins [BR:char01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      105912249 (hcfc1a) Chromosome and associated proteins [BR:char03036]  Eukaryotic type   Histone modification proteins    HAT complexes     NSL complex      105912249 (hcfc1a)    HMT complexes     COMPASS/SET1 complex      105912249 (hcfc1a)     MLL-HCF complex      105912249 (hcfc1a)    Polycomb repressive complex (PRC) and associated proteins     PR-DUB complex      105912249 (hcfc1a) Mitochondrial biogenesis [BR:char03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     105912249 (hcfc1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3 Motif Other DBs NCBI-GeneID:  105912249 NCBI-ProteinID:  XP_012696638 Ensembl:  ENSCHAG00000001262 UniProt:  A0A6P3WEJ1 LinkDB All DBs Position 5:4219063..4240719 Genome browser AA seq 1808 aa AA seqDB search MTSPGSALSGTSGSTLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE WKKLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR PGSSVAGWDIPITYGVLPPPRESHTAVVYTEKDSKKSRLIIYGGMSGCRLGDLWTLDIDT LTWNKPSVSGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLASL NLDSMNWENVLMDTLEDNVPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL ETEKPHAPTRVQLVRANTNSLEVSWGAVPMADTYLLQLQKYDIPTATAATSPSLNSATSL PSNSPKSPAPASAAPATQSLPQTGISLVHQASSPTAQGLPVLPNMPGSPLGASTARGPAI LKVAAPQGGTGTSIVTVRQANQAGKSPVTVTSLPAGVRMVIPAQTTQGTPIGSSPQMSGM AALAAAAAATQKIPPSSTVLNLPPGATIMKTMAGTPGSTTVKMASPVMVSNPATRMLKTA AAQVGTATVSSPNTSTRPIITVHKSGTVTVAQQAQVVTTMVGGVTKTITLVKSPISMAGG GTLFSNLGKVMSVVQTKPGQSALTGQTSTNPLHQLIQSKGGLPAGTILKLVTSADGKPTT IITTSQAGVGGAKPTILGVSSMSPTTTSKPGTTTIIKTIPMSALMSQQGATGVTSSGGMK TPIHIITTKMMTSGTGTPGKFITAMPKLGTAGQQGLTQVVLKGAPGQPGTILRTMPMSGV RLVSPVTASGVKPNVTTFVVKGTTGVTTLGTVTGTVSTSLASGSVASANASLATPITTLG TIATLSSQVINPATITVSAAQTNLTTATALPTTSIQSAGQPTQVTLITSPSSVEAQVGQD LPVSILSSPTSEQPSSSETTGSDTPGSVTLVCSNPPCETHETGTTNTATTATANMGVPQR VCSNPPCETHETGTTNTATTASSSMGGGTQVCSNPPCETHETGTTNTATTASSSMGGGTQ VCSNPPCETHETGTTNTATTASSGMGAAGQTSTVQRVCSNPPCETHETGTTNTATTASSG MGGAGQTSTVQRVCSNPPCETHETGTTNTATTASSGMGAAGQTGTAQRVCSNPPCETHET GTTNTATTATCNMETGEGAAQQSEQSSEASSSTEVPATSSTAAISSRAVTMVTQATPAPG PSVPSISSITESSPGAVPAELTQDELTAAGSSEAVPSEEPMQTDCPPEGAMPMEEGDSAQ AAEMEAAAAAAAAAASSQETEALSLPPELMSEGQSTTLMVTGLTPEELAVTAAAEAAAQA AATEEAQALAIQEAASEEAQALAIQAVLQAAQQAVMSESYFNGEGGSEQQQQQHHHTIPI VLTPQELAALVQQQHQLQEAQAAAQQQQQQQQQQQQQQQQQQQQQQQQQQATPTEGLAPA DSLNDPASESNGHGDMAAAVSSAVAGLLPSMAAETLAPSNTFAAVAVATPIKIQAAAALA EVANGIEVRKQSAPPAPIRVPVKKENQWYDVGIVKVTNMVVTHYYVPGDDAAYSEDDSGA MPDYTQMKRMELQPGTAYKFRVAGVNACGRGNFSEISAFKTCLPGFPGAPCAIKISKSPD GAHLTWEPPSVTSGKIIEYSVYLAIQSSQTTEAKPSAPAQLAFMRVYCGPSPSCLVQSSS LSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESSKDAAAKPAAKRAVSSPDVKAG PKKARMDQ NT seq 5427 nt NT seq  +upstreamnt  +downstreamnt atgacatcccctggttccgctttgtctggaaccagcggttcaacgcttcagccgcgttgg aagcgggttcttggatggtctggtcccgtccctcggccaagacatgggcacagagcagtt gctattaaggagcttatggtggttttcggaggagggaatgaaggaatcgtcgatgagctc cacgtttataacacagctaccaaccagtggtttatcccagctgtgcgtggggacatccct ccaggctgtgcagcatacggctttgtgtgcgatggtacccgactgctggtgttcggaggg atggtggagtatgggaagtacagcaatgacctttacgagctgcaggccagtagatgggaa tggaagaagctgaagccaaaagccccgaagaatgggcccccaccttgcccccgcctgggc cacagcttctctctggtgggcaacaagtgctacctgtttggagggctagccaatgacagc gaagaccctaaaaacaacattcccaggtatctaaatgacctttacacgctggagctgcgt ccgggctcttctgtggcgggctgggacatccccatcacatacggtgtgctgcctccacca cgcgagagccatactgcagtggtctacacagaaaaggactccaagaagtcccggctcatc atctacgggggcatgagtggctgccgcctgggagacttgtggaccctcgacatagacacc ctcacctggaacaagccctcagttagtggcacagctcccctcccacgcagtctccactca gcaactactatcacaaacaagatgtttgtttttggaggctgggtgcccctggtcatggat gatgtgaaagtggccacacatgaaaaggagtggaagtgtacaaatacactggctagcctc aatctggattcaatgaattgggagaacgttttgatggacaccctggaagataatgtacca agagcccgtgcaggacactgctcagtggccatcaactctcgactgtatgtgtggagtgga cgagatgggtaccgtaaagcctggaacaaccaggtgtgctgcaaagatctgtggtacctt gagacagagaagccacacgctcccacgcgcgtgcagctggtccgtgccaacaccaactcc ctggaggtcagctggggcgcggtgcccatggctgacacctacctgctgcagctgcagaag tacgacatccccactgccacggcggccacctctccctccctcaactccgctacctctctg cccagcaactctcccaagagccccgcgccagcgtccgctgcacctgccacccagagcctg ccacagacgggcatcagcctggtgcaccaagcctcctcccctacagcacaaggcctaccc gtcctgccgaacatgccaggcagccctcttggagcctccacagctcgtggcccagccatc ctgaaagttgcagctccccagggtggcactggcacctccattgtcactgtgcgccaagcc aaccaagctgggaaatccccagtcactgtgacatcacttcctgcaggtgttcgcatggtt ataccagcacaaaccacacagggaacgccaatcggaagcagccctcagatgagtggcatg gcagctctggctgctgctgcagctgcaactcagaagatcccgccctcatccacggtgctg aatcttccacctggggccaccatcatgaaaactatggctggaacgccaggctccaccaca gtcaaaatggcctccccagtcatggtgagcaaccccgccacccgcatgctgaagacggcc gctgctcaggtcggcacagcaaccgtctccagccccaacacctccacgcgccccatcatc acggtgcacaagtccggcacggttactgtggcacagcaagcccaggtggtcaccacgatg gtgggtggggtcaccaagaccatcactctcgttaagagccccatctctatggcaggagga ggaacactgttctcaaacctggggaaggtgatgtccgttgtgcagacaaagccaggacag tctgcattgaccggacagacctccaccaacccactccatcagctcatacagtcaaaaggg ggtcttcctgcaggcaccattctgaagctggtaacgtctgctgatggtaagcccaccacc atcatcaccaccagccaggcaggggtgggcggcgccaaacccaccatcctgggcgtcagc agcatgtcacccactaccacctccaaaccaggcaccactaccatcatcaagaccatcccc atgtctgccctcatgtcccagcaaggggccactggtgttaccagcagtggggggatgaag acccccatccacatcatcaccaccaagatgatgacctctggcacgggcactcctggaaag ttcatcactgccatgccaaagctgggcactgcagggcagcagggccttactcaggtggtc ttgaagggagcaccaggtcagcctgggacaatcctacgaacaatgcccatgagcggagtt cgactggttagcccagtaactgcatctggtgttaagccaaatgttactacttttgtcgtc aaaggaaccacaggggtcacaaccctgggcacagtcacagggacagtttccacaagcctg gccagtggaagcgtcgccagtgccaacgcctctctggccacacccataaccacactgggc accatcgccactctgtccagtcaggtgatcaacccagcgaccatcactgtgtccgcagca cagaccaacctcaccacagcaactgcccttcccaccacctccatacagtctgcaggccag cccacccaggtgacccttatcacgagccccagcagtgtagaggctcaggtaggtcaggac ctgcccgtgtccatcctgtcatcgcccacgtccgagcagcccagctcctccgagacgact ggcagcgacacccccggctcagtcacgctcgtgtgctccaacccgccatgcgagacgcac gagacgggcaccaccaacactgccaccacagccaccgccaacatgggagtcccgcagcga gtctgctccaaccctccctgcgagacccacgagacgggcaccaccaacaccgccaccacg gcgtcctctagcatgggtgggggcactcaggtttgctccaacccgccctgcgagactcac gagacgggcaccaccaacactgccaccacggcgtcctctagcatgggtgggggcactcag gtttgctccaacccgccctgcgagactcacgagactggcaccaccaacaccgccaccact gcgtcctctggcatgggtgctgctgggcagacgagcactgtgcagagggtgtgttccaac ccgccctgtgagacccacgagacgggcaccaccaacacggccaccactgcgtcctctggc atgggtggtgccgggcagacgagcactgtgcagagggtgtgttccaacccgccctgtgag acccacgagacgggcaccaccaacacggccaccactgcgtcctctggcatgggtgctgct gggcagacgggcactgcgcagagggtgtgttccaacccgccctgtgagacccacgagacg ggcaccactaacactgcaaccacagccacctgcaacatggagactggagaaggcgcagcc caacaaagtgaacagtcttcagaagcatccagcagcacagaggtgcctgctacatcgtcc acggccgctatatctagtcgagccgtcaccatggttactcaggccacacctgcacctgga ccctcggtaccttccatctcgtccatcactgaatcgtcgccaggtgcagtaccagctgag ctcactcaggacgagctgactgcagcgggcagctcggaggctgtgccatctgaggagccc atgcagacagactgccctccagagggcgccatgcccatggaggagggggattctgcacag gcggctgagatggaggcagcagcagcagcagcagcagcagcagcgtcgtcccaggagaca gaggctctaagcctgcccccggagctcatgtcagagggccagtccaccactctgatggtg acagggctgacccctgaggagctggccgttaccgccgcagcagaggccgcagctcaggcc gccgccacagaagaagcccaggccttggccatccaggaggcagcctccgaggaggcccag gccctggccatccaggcagtgctgcaagctgcccagcaggctgtcatgagtgagtcctat tttaatggcgagggtggctctgagcagcagcagcagcagcaccaccacaccatccccatc gtgctgaccccacaggagctggctgcactcgtccagcaacagcatcagctccaggaggcc caggctgccgcccagcagcagcaacaacaacaacaacaacagcagcagcagcaacaacaa caacaacagcagcagcagcagcagcagcaggccacacccaccgagggcctggcccccgct gacagcctcaacgaccccgcctctgagagcaacggccatggcgacatggcggccgccgtc tccagcgcggtcgccgggctgctgcccagcatggctgcagagacgttggcaccatccaac acctttgcagcagtagcagtcgccactcccatcaagatacaggcagcagcagcactggct gaagtggccaatggcattgaggtgaggaagcagagtgcacctcctgcccccatcagagtg ccggtgaagaaggagaaccagtggtacgatgtgggaatcgtcaaggtgaccaacatggtc gtgactcattattatgtaccaggagatgacgccgcctactcggaggatgactcaggagcc atgcctgactacacccaaatgaagaggatggagttgcagccgggtacagcatacaagttt cgcgtggcaggcgtcaatgcctgcggacgtggcaacttctcagaaatatccgctttcaag acctgcctgcctggcttcccaggggcaccctgtgccatcaaaatcagcaagagcccagac ggtgcgcacctgacgtgggagccgccgtcggtcacgtccggcaagatcatcgagtactcc gtgtacctggccatccagagctcgcagaccactgaggccaagccgtcggcaccggcccag ctggccttcatgcgggtgtattgcgggcccagtccatcctgcctggtgcagtcctctagc ctatccaacgcccacatcgactacaccaccaagcccgccatcatcttccgcattgccgcg cgcaatgagaagggctatggccctgccacacaagtccgatggctccaagagtcaagcaaa gatgccgcagccaagccggccgctaaaagagcagtgtcctccccagatgtgaaagctggt cctaagaaagcacggatggaccagtga

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