Clupea harengus (Atlantic herring): 105912262
Help
Entry
105912262 CDS
T09045
Name
(RefSeq) cytochrome b-c1 complex subunit 1, mitochondrial
KO
K00414
ubiquinol-cytochrome c reductase core subunit 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00190
Oxidative phosphorylation
char01100
Metabolic pathways
char04260
Cardiac muscle contraction
Module
char_M00152
Cytochrome bc1 complex
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
105912262
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105912262
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105912262
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M16: pitrilysin family
105912262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M16
Peptidase_M16_C
Virulence_RhuM
DUF4416
Motif
Other DBs
NCBI-GeneID:
105912262
NCBI-ProteinID:
XP_012696658
Ensembl:
ENSCHAG00000019228
UniProt:
A0A6P3WEL0
LinkDB
All DBs
Position
5:5297974..5303361
Genome browser
AA seq
478 aa
AA seq
DB search
MAASVCRAGSTVGRVLAKSRSPLLLSLRRGQASVSYAQSILGAPDTRLSSLENGLRVASE
ETGQATCTVGLWISSGSRYESEKNNGAGFLLEHMAFKGTKQHPQSALEAEVEAMGAHLSA
YTSREHTAYYMKTLSKDLPKAVALLSEVVQSNSLSEAELEAQRSVVLRELEEVETSLQDV
CLDLLHATAFQGTPLGHSALGPSVNARTLTRQDLVEYINSHYKAPRMVLAAAGGVNHDEL
VGLAQKHLSGVSFEYEDDAVPVLSPCRFTGSEIRMRDDAMPLAHIAIAVEGAGAASPDCV
PLMVANSIIGSYDVTFGGGKHLSSRLARLSAELGLCQSFQAFHSTYSDTGLLGIYFVTDR
NNIEDMMHWSQNAWMNLCTTVTESDVARAKNLLKASLVGQLNGTTPMCDDIGRHILNYGR
RIPLAEWDARIDEVTPRMVRDVCSKYIYDKCPAVAAVGPVEQLPDYNRMRSAMYWLRF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtccgtgtgtcgagccgggagtactgtagggcgagttctcgccaaatctcgt
agcccacttctgctctccttgagacgtggccaggcttcagtctcatatgctcaaagcatc
ttgggagcccctgacactcgtctgtcttctcttgaaaatggtcttcgggtggcatctgag
gagactggacaggctacatgcacggttggactgtggataagctctgggagtcgctatgag
tctgaaaagaacaatggtgcagggtttttattggaacacatggctttcaagggaacaaaa
cagcaccctcagagtgccctggaggccgaagtcgaggctatgggggcccacttgagtgca
tacacttcccgggagcacacggcatactacatgaagaccttatccaaggacctgcccaaa
gctgtggcgcttctgtcagaggtggtgcagagcaactccttgagtgaggctgagctggaa
gcgcagaggagcgtggtgctccgtgagctggaggaggtggagaccagcctgcaggacgtg
tgcctggacctgctgcacgccaccgccttccagggcaccccactgggacacagcgccctt
ggaccgtccgtcaacgccagaactctgactcgccaggacttggtggagtacatcaacagc
cactataaagctccccgtatggtgctggccgcagctggaggagtaaaccatgatgagctg
gtgggtttggcccagaagcacctgagcggcgtctccttcgagtacgaggacgatgccgtg
ccagtgctgtctccctgccgcttcacaggaagtgagatccgtatgcgtgacgatgcgatg
cccctggcacacattgccattgcggtagagggagctggtgccgccagcccagattgtgtg
cccctcatggtggctaacagcatcattggcagctatgatgtcacttttggtggaggaaag
cacctcagcagccgtctggcgcggctgtccgctgagcttggcctgtgccagagcttccag
gccttccactccacctacagcgacacgggcctgctgggcatctacttcgtcactgacaga
aacaacatcgaggacatgatgcactggtctcaaaatgcctggatgaacctgtgcaccaca
gtcacagagagtgatgttgcccgggccaagaacctccttaaggccagcctggtgggacag
ctgaacggcacaactcccatgtgtgacgacatcggaaggcacattctgaactacggccgc
cgcatcccactggctgagtgggatgccaggattgatgaagtgacgccgaggatggtccgt
gatgtctgttccaaatatatctacgacaagtgtcccgctgtcgccgcagttggtcccgtg
gaacagctgcccgactacaacagaatgcgcagcgccatgtactggctccgcttctag
DBGET
integrated database retrieval system
