KEGG   Clupea harengus (Atlantic herring): 105912278
Entry
105912278         CDS       T09045                                 
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04137  Mitophagy - animal
char04144  Endocytosis
char04145  Phagosome
char04148  Efferocytosis
char05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105912278
   04145 Phagosome
    105912278
   04137 Mitophagy - animal
    105912278
   04148 Efferocytosis
    105912278
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    105912278
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105912278
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    105912278
   04031 GTP-binding proteins [BR:char04031]
    105912278
Membrane trafficking [BR:char04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    105912278
 Endosome - Lysosome transport
    105912278
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   105912278
  Exosomal proteins of other body fluids (saliva and urine)
   105912278
  Exosomal proteins of colorectal cancer cells
   105912278
  Exosomal proteins of melanoma cells
   105912278
GTP-binding proteins [BR:char04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    105912278
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase Gtr1_RagA AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 105912278
NCBI-ProteinID: XP_012696678
Ensembl: ENSCHAG00000018998
UniProt: A0A6P3WEQ7
LinkDB
Position
5:complement(5249225..5256177)
AA seq 218 aa
MAARPVRPNGQSPANKVCQFKLVLLGESAVGKSSLVLRFVKGQFQEFQESTIGAAFLTQT
VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVMYDMTNTDTFGRAKTWVSELQRQ
ASPNIVIALAGNKADLSANRTVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFMAIAKKL
PKSEPQAGPGATATGRAGRGGVDLNQPTQTNKTQCCGN
NT seq 657 nt   +upstreamnt  +downstreamnt
atggcagcacgtcctgttcggccaaacggccagtccccagccaacaaggtctgccagttt
aagctggtgctgcttggggagtccgcagttggaaaatccagcctggtcctgcgctttgtg
aagggccagttccaggagtttcaagagagcaccatcggagctgctttcctgacacagaca
gtgtgtttggatgacaccacagtgaagtttgagatctgggacacggcaggacaggagaga
taccacagcctggcaccaatgtattatagaggagcacaggcggccattgtgatgtacgat
atgaccaacacagatacatttggccgggcgaagacctgggttagcgaactgcagagacaa
gcaagtcccaacatcgtgattgccctggctggaaataaggctgacctatcagccaacaga
accgtggagtatgaggaggcacaggcctatgcagatgataacagcctgctatttatggaa
acctctgccaagactgcaatgaacgtcaatgatctcttcatggccatagccaagaagctg
ccaaagagcgaacctcaggccgggccaggagccacagcgacaggccgtgcaggccgagga
ggagtggacctaaaccagcccactcagaccaacaagacccagtgctgtgggaactaa

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