Clupea harengus (Atlantic herring): 105912278
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Entry
105912278 CDS
T09045
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04137
Mitophagy - animal
char04144
Endocytosis
char04145
Phagosome
char04148
Efferocytosis
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105912278
04145 Phagosome
105912278
04137 Mitophagy - animal
105912278
04148 Efferocytosis
105912278
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105912278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105912278
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105912278
04031 GTP-binding proteins [BR:
char04031
]
105912278
Membrane trafficking [BR:
char04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
105912278
Endosome - Lysosome transport
105912278
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105912278
Exosomal proteins of other body fluids (saliva and urine)
105912278
Exosomal proteins of colorectal cancer cells
105912278
Exosomal proteins of melanoma cells
105912278
GTP-binding proteins [BR:
char04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
105912278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
105912278
NCBI-ProteinID:
XP_012696678
Ensembl:
ENSCHAG00000018998
UniProt:
A0A6P3WEQ7
LinkDB
All DBs
Position
5:complement(5249225..5256177)
Genome browser
AA seq
218 aa
AA seq
DB search
MAARPVRPNGQSPANKVCQFKLVLLGESAVGKSSLVLRFVKGQFQEFQESTIGAAFLTQT
VCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVMYDMTNTDTFGRAKTWVSELQRQ
ASPNIVIALAGNKADLSANRTVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFMAIAKKL
PKSEPQAGPGATATGRAGRGGVDLNQPTQTNKTQCCGN
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacgtcctgttcggccaaacggccagtccccagccaacaaggtctgccagttt
aagctggtgctgcttggggagtccgcagttggaaaatccagcctggtcctgcgctttgtg
aagggccagttccaggagtttcaagagagcaccatcggagctgctttcctgacacagaca
gtgtgtttggatgacaccacagtgaagtttgagatctgggacacggcaggacaggagaga
taccacagcctggcaccaatgtattatagaggagcacaggcggccattgtgatgtacgat
atgaccaacacagatacatttggccgggcgaagacctgggttagcgaactgcagagacaa
gcaagtcccaacatcgtgattgccctggctggaaataaggctgacctatcagccaacaga
accgtggagtatgaggaggcacaggcctatgcagatgataacagcctgctatttatggaa
acctctgccaagactgcaatgaacgtcaatgatctcttcatggccatagccaagaagctg
ccaaagagcgaacctcaggccgggccaggagccacagcgacaggccgtgcaggccgagga
ggagtggacctaaaccagcccactcagaccaacaagacccagtgctgtgggaactaa
DBGET
integrated database retrieval system