Clupea harengus (Atlantic herring): 105912307
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Entry
105912307 CDS
T09045
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
105912307
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
nSTAND_NTPase4
IL17R_fnIII_D2
Motif
Other DBs
NCBI-GeneID:
105912307
NCBI-ProteinID:
XP_031434418
UniProt:
A0A6P8G3G0
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Position
13:complement(20341449..20351003)
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AA seq
642 aa
AA seq
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MAAGPVAMQEPVCLINNEEGGGLSVQQEALEILQQIQQPVVVVTIVGPYRSGKSYLMNRL
AGKQTGFALGNTIESKTKGIWMWCVPHPSKEGHTLVLLDTEGLGDVNKGDSKHDTKIFAL
AILLSSTLVFNSRGTIDNKAIEELQYVTELSNYIKVKSSDEGDNTEFVRFFPNFIWAVRD
FTLERKIDSKEVTSDEYLEYALQLKPGRSRNVMEYNLPRECIRNYFPSRRCFTFPVPTHP
DNMSRLESLNPDELSRDFLKVAEHFCKYVFMQSKVKSPKDGYEVNGKVLGHLAKMYVDTI
SSGGMPCLENAVITISELENKAAVEDGTRVYQTGMEQLKQSFPVELTVVSAEHQRLYTMA
IQTFMNRCFKDDEGKYLNSLEKDLHQRFDQYLHHNEKASKKICQDLLTSLSAKMTDQLQK
GFYAKPGGYKLFSKDMESIVEEYNSQTTKLVKAKDVMEEFLRSKYMEAESIRQADTKLSE
QEKQICEERERALLLQQKMEAEEEERRKLEVKMKADRESFEERMKQTEKKSEEERKLKEK
EFVKVLESKMREQKQMLEKQEVEEDRRKHKEDQAVQAKQFEQMMENFRSDRKDQDQRHQQ
SMALMQQQHEQAMAKMQQSRGSSSDVLLAKLVWVFRVVGYLT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaggtccagtggccatgcaggagccggtgtgtctgattaacaatgaggagggt
gggggcctgagtgtgcagcaggaggctttggaaatactgcagcagatccagcagccggtg
gtggtggtgactatagtggggccctaccggagtgggaaatcctacctgatgaaccggctt
gctggaaaacaaacaggttttgccctgggcaacactattgagtctaagaccaaaggaatc
tggatgtggtgtgtacctcatccttctaaagaaggacacacactggtgctgctggacaca
gagggattgggagacgtgaacaagggagactcaaaacacgacacgaagatctttgctcta
gccattctgctgagcagcactctggtcttcaacagccgaggtaccattgataacaaggcc
atagaggagctccaatatgttacagagctttcaaattatataaaggtcaaatcatccgat
gaaggagacaatacagagttcgtgaggttcttcccaaattttatctgggctgtgagggac
ttcactctggagcgaaagattgacagcaaggaagtgacttcggatgaatacctagagtac
gcccttcagctgaagcctgggcgttcgagaaatgtgatggagtataaccttccaagagag
tgcatccgaaattattttccatctcgaaggtgtttcacattcccagttccgactcatcca
gacaatatgtctcgtttggagagtttgaatccagatgagctttcacgtgattttctgaag
gttgcagaacatttctgcaagtatgttttcatgcagtccaaagtgaaatcgccgaaagac
ggatacgaggtcaatgggaaagtcctgggtcatctagcaaagatgtacgtggacaccatc
tccagtggtggcatgccctgtctggagaatgcagtgatcaccatttcagagcttgagaat
aaagctgcggtggaagatgggactcgggtgtaccagactggcatggagcagctgaagcag
tccttccctgtagagctgacggtcgtctccgctgaacatcagcgcctctacaccatggcc
attcagacgttcatgaaccgatgctttaaggatgatgagggaaagtacctgaactcttta
gagaaagaccttcatcaacgttttgaccagtatttacaccacaacgagaaggcttcaaag
aaaatatgccaagatcttctgacaagtctctctgctaaaatgaccgatcagctccagaaa
ggtttctacgctaaacctggtggttacaaactcttcagcaaggacatggagagcattgtg
gaggaatacaacagtcagacgactaaattagtcaaggctaaagatgtcatggaggagttt
ttaaggagcaagtatatggaagctgaatccatcaggcaggcggatacgaagctgagtgag
caggaaaaacagatttgtgaggagagagagagagccttgctcttgcaacaaaaaatggag
gctgaagaggaagagaggcgcaagttggaagtgaagatgaaagcagatagggagagtttt
gaagagaggatgaaacagacagagaagaagagtgaggaagagaggaaactaaaggagaag
gagtttgtgaaggttctagaaagtaagatgagggagcagaaacagatgttggagaagcag
gaggtagaggaggacaggaggaagcataaggaagatcaagctgtacaggccaagcagttt
gaacagatgatggagaacttcaggagcgacaggaaggatcaggaccaacgacatcagcag
tccatggctctaatgcagcagcaacacgagcaagccatggcaaaaatgcaacaaagcaga
ggttctagttctgacgtgttgctagccaaactggtgtgggtgttccgtgtagttggatac
cttacttga
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