Clupea harengus (Atlantic herring): 105912316
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Entry
105912316 CDS
T09045
Name
(RefSeq) protein quaking-B isoform X2
KO
K14945
protein quaking
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105912316
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105912316
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GFIT
Motif
Pfam:
STAR_dimer
KH-I_KHDC4-BBP
KH_1
KH_KRR1_2nd
KH_12
Motif
Other DBs
NCBI-GeneID:
105912316
NCBI-ProteinID:
XP_012696725
Ensembl:
ENSCHAG00000008756
UniProt:
A0A6P3WET6
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All DBs
Position
13:20570506..20647235
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AA seq
346 aa
AA seq
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MVGEMETREKPKPSPDYLMQLMNDKKLMSSLPNFCGIFNHLERLLDEEISRVRKDMYNDT
LNGSMEKRNPELPDAVGPVVQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEAETGCK
IMVRGKGSMRDKKKEEQNRGKPNWEHLNEDLHVLITVEDAQNRAEIKLKRAVEEVNKLLV
PAAEGEDSLKKMQLMELAILNGTYRDANIKSPALAFSLAASTQAPRLITGPGPVLPHNAM
RAPTPAGPTLMPLIRQIQTVMPNGSPHPGATLVQQGPESGGLIYATPYDYPYALAPAGSL
LEYPLDSSGVLASSKAEELPVYLGFHTCHLPLAVSRSETHPGRPPF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgggggaaatggagacgagagagaagccgaagccgagcccagactatctgatgcag
ctgatgaacgataaaaaactgatgagcagtttgcccaacttctgtgggattttcaaccac
ctagaacgcctgcttgatgaagaaatcagtcgggtgcggaaggacatgtataacgacacg
ctgaacggcagcatggagaagcggaaccctgagcttccagacgccgtcggaccggtggtg
cagcttcaggagaaactctacgtgcctgttaaagagtaccccgactttaacttcgtgggg
cggatcctgggtccacggggcctcacggccaaacagctggaggctgagaccggctgcaag
ataatggtgcgggggaaaggctccatgagagacaagaagaaggaggagcagaaccgggga
aagcccaactgggagcatctgaacgaggacctgcacgttctcatcacggtggaggacgcc
cagaacagggccgagatcaagctcaagagggccgtggaggaggtcaacaagctactggtg
cctgcagcggagggagaggacagcctgaagaagatgcaacttatggagttggccatcctg
aacggcacctacagagatgccaatatcaaatcacctgcccttgccttctctcttgcagcc
agtacccaggctcctcgcctcatcacgggtcctggccccgtcctgccccataacgccatg
cgcgcccccacccccgcaggccccaccctcatgcctctcatccgccagatccagacggtc
atgcccaacggctctccgcaccccggcgccacgctggttcagcagggacccgagtcgggc
gggttgatctacgccacgccgtacgactacccgtacgctctggcgcccgcgggctcgctg
ctcgagtaccccctggactccagcggggtgctagcgtcctcaaaggcggaggagctgccc
gtgtacctgggcttccacacctgtcacctgcctctggccgtgagccgctcagagacacac
cccggccgcccgcccttctaa
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