Clupea harengus (Atlantic herring): 105912400
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Entry
105912400 CDS
T09045
Name
(RefSeq) LARGE xylosyl- and glucuronyltransferase 1-like isoform X1
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00515
Mannose type O-glycan biosynthesis
char01100
Metabolic pathways
Module
char_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
105912400
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105912400
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
105912400
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Glyco_transf_24
WD40_alt
Motif
Other DBs
NCBI-GeneID:
105912400
NCBI-ProteinID:
XP_031438382
Ensembl:
ENSCHAG00000027266
UniProt:
A0A6P8GSG2
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Position
16:complement(19495760..19544155)
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AA seq
777 aa
AA seq
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MLGMCRGRRRFLAFSLALLFIPALTWLYLSVGNFQVRHLPLSPLEPQSSALIGGGAGERQ
ALELRVREVEEENRALRKELSQPPRSPSRPHQTGHHGNGSLPHSSEDATKHNEAQRGGIG
ANGSDCIQQPAVDKCETIHLAIVCAGYNASRDVVTLVKSVLFHRRNPLHFHFITDSIAQR
ILASLFHTWMVPAVRVDFYDADELKSEVSWIPNKHYSGIYGLMKLVLTKALPSDLKKVIV
LDTDITFATDIAELWAVFHKFTGQQVLGLVENQSDWYLGNLWKNHRPWPALGRGFNTGVI
LLLLDRLRKLRWEQMWRLTAERELMSMLSTSLADQDIFNAVIKQNPFLVHQLPCFWNVQL
SDHTRSEKCYKDVADLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCP
SETDHNSANLQKTLLELDEDDPCYEFRRERFTVHRTHLYFLHYEYEPSADNTDVTLVAQL
SMDRLQMLEAICKHWEGPISLALYLSDAEAQQFLRYAQGSEVLMSRGNVGYHIVYKEGQF
YPVNLLRNVAMRQVNTPYMFLSDIDFLPMYGLYESLRKSVVQLDMASTKKALVVPAFETL
RYRLSFPKSKAELLSQLDMGTLFTFRNDLGLTTQRKPPHHFHDSEIKYHVWMKGHAPTNF
AKWRTATTPYHVQWEADFEPYVMVRRDSPEYDRRFVGFGWNKVAHIMELDAQEYEFVVLP
NAYMIHMPHAPSFDITKFRSNEQYRVCLKTLKEEFQQNMSRRYGFAALKYMTAENNS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgctgggaatgtgtcgtgggcgcaggaggttcctggccttctccctcgccctgctcttc
atcccagcgctcacctggctctacctctccgtcggcaacttccaggtgaggcacctcccc
ctgtcgcccctggagccccagtcctccgctctgattggtggaggagccggggagcgtcag
gccctggagctgcgcgttcgtgaggttgaggaggagaaccgcgccctgaggaaggagctc
agccagccgccccgcagcccctcccgcccgcaccaaacgggccaccatggcaacggctcg
ctgccacactccagtgaggacgccaccaagcacaacgaggctcagagggggggtatcggg
gccaacggctctgactgcattcagcagcccgctgtggacaagtgtgagacgatccatttg
gcaatcgtgtgtgccggctacaatgccagcagggatgtggtaacgctggtgaagtccgtc
ctgtttcacaggcgcaacccactgcacttccacttcatcacggactccatcgcccagcgc
atcctggcctccctcttccacacctggatggtgccggccgtacgtgtggacttctacgac
gcagacgagctgaagtctgaagtgtcctggatccccaacaagcactactctggcatctat
gggctcatgaagctggtgctgaccaaagcgctgccctctgacctcaagaaggtcatcgtg
ctggacaccgacatcaccttcgccaccgacatcgccgagctttgggccgtcttccacaag
ttcacagggcagcaagttctgggtctggtggagaaccagagtgactggtacctggggaac
ctttggaagaaccatcggccgtggccagccctgggtagaggcttcaacacaggtgtgata
ctgctccttctggaccgcttgaggaagctccgatgggaacagatgtggaggctgaccgca
gagagggaactaatgagtatgctgtcgacctcactagcagaccaggacatcttcaacgcg
gtgatcaaacagaaccccttcctggtgcaccaactgccctgcttctggaatgttcagctg
tcggatcacactcgctccgagaagtgctacaaagacgtggcagacctcaaggtgatccac
tggaactctcctaagaagctgcgtgtgaagaacaagcacgtggagttcttccggaacctc
tacctgacgttcctggagtacgacgggaaccttctgaggcgggaactcttcggctgcccc
agcgagaccgaccacaacagcgctaaccttcagaagactctgttggagctggatgaggac
gacccgtgctacgagttccggcgggagcgtttcaccgtgcaccgcacacacctctacttc
ctgcactatgagtacgagcccagcgccgacaacaccgacgtcacactggtggcccagctg
tccatggacaggctgcagatgctggaggccatctgtaagcactgggagggccccatcagt
ctggccctctacctgtctgacgccgaggcccagcagttcctgcgctacgcccagggctcg
gaggtgctgatgagcagaggcaacgtgggctaccacatcgtctacaaggaggggcagttc
taccccgtcaacctgctgcgcaacgtggccatgaggcaggtcaacacgccatacatgttc
ctgtccgacatcgacttcctgcccatgtacggcctctatgagtccctcaggaagtctgtg
gtgcagttggacatggccagcaccaagaaggctctggtggtgccggcattcgagacgctc
cgataccgtctgtctttccccaaatccaaagctgagcttctgtcccagctggacatgggc
actctcttcaccttcagaaacgatctaggcctaacaactcagagaaagcccccgcatcac
ttccatgacagcgagatcaagtatcacgtttggatgaaaggccacgcccccaccaacttt
gccaaatggcggacggccacaacgccctatcacgtgcagtgggaggcggactttgagccg
tacgtcatggtgaggcgggactccccagagtacgaccggagattcgtgggcttcggctgg
aacaaggtggcccacatcatggagctagatgcccaggagtatgagtttgtggttctgccc
aacgcctacatgatccacatgcctcacgccccaagtttcgacatcaccaagttccgctcc
aacgaacagtaccgcgtctgcctcaagacgctcaaggaagagttccagcagaacatgtcc
cgtcgctacggtttcgccgcgctcaagtacatgacggcggaaaacaacagctag
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