Clupea harengus (Atlantic herring): 105912408
Help
Entry
105912408 CDS
T09045
Name
(RefSeq) shaker-related potassium channel tsha2
KO
K04879
potassium voltage-gated channel Shaker-related subfamily A member 6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105912408
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105912408
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105912408
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Potassium channel, voltage-gated (Kv)
105912408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
BTB_2
Ion_trans_2
PKD_channel
Motif
Other DBs
NCBI-GeneID:
105912408
NCBI-ProteinID:
XP_031438820
Ensembl:
ENSCHAG00000027408
UniProt:
A0A6P8GVL3
LinkDB
All DBs
Position
16:complement(19853244..19863748)
Genome browser
AA seq
478 aa
AA seq
DB search
MTVVPGENLDETVALAALSQDVYDPERADQECCERVVINISGLRFETQLKTLAQFPTTLL
GDPRKRMRFFDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRPVNVPLDIFMEEIKFYELG
EDTIEHFKEDEGFIKEEERPLPEGEFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVI
FCLETLPEFREEGKIFEEQLSLNGTVSVKKPNPFTDPFFIVETLCIIWFSFELLVRFLAC
PSKPAFFKNIMNTIDIVAIMPYFITLGLELAEHQGNGQQAMSLAILRVIRLVRVFRIFKL
SRHSKGLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAETDDPESGFSSIPDAFWW
AVVSMTTVGYGDMCPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEHEEQF
TYTHVTCGQQQPSFGEFKNSDSKPSLSKSDYLESDDADSIKYTNCSPHKAYTGKLTDV
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacagtggtgcccggggagaacctggatgagactgtggcactggccgccctgtcccaa
gatgtctacgaccccgagagagcggaccaggagtgctgcgagcgggtggtcatcaacatc
tccgggctgcgcttcgagactcaactgaaaacactcgcgcagttcccaaccaccttactt
ggggaccccaggaaaagaatgcgcttttttgatccactgagaaatgaatacttctttgac
agaaatcgtccgagcttcgatgccatcctttatttctaccagtctggtggcagactacga
agacctgtcaacgtccccttggacatattcatggaggagatcaaattttacgaattggga
gaggatacgatcgaacatttcaaagaggacgaggggttcatcaaggaagaagaacgcccg
ctgccagaaggcgagtttcagcgtcaagtctggctcctcttcgaatacccggagagctca
ggaccagctaggggtatagcaatagtttcagttttggtcattttgatatccattgtcata
ttttgtttagagacgttaccggaattccgagaggaagggaaaatctttgaggagcagctc
tccctaaatgggactgtgagcgtaaagaaaccaaatccgttcacagaccccttctttatt
gtggagacgctctgtatcatttggttctcttttgaactgctggtgagatttctcgcgtgt
cctagcaagcccgccttcttcaaaaatatcatgaacaccatcgacatagtagcaattatg
ccctactttattaccttgggcttggagctagctgaacaccaagggaacggccagcaagcg
atgtctctggccatcctacgagtcattcgcctggtgcgagtgttcaggattttcaagctc
tccaggcactccaaaggtctccaaatccttgggaagaccctgcaggcgagcatgcgagaa
ctaggtctcctcatattcttccttttcattggagtaatactgttttcgagcgcagtgtat
ttcgcggagactgacgatcccgaatcggggttcagcagcatccccgatgcgttttggtgg
gcggtggtgtccatgaccactgtgggctatggtgacatgtgcccggtgaccatcggtggc
aaaattgtggggtctttgtgtgccattgctggtgtactgaccatcgcactacctgtccct
gtaattgtctccaatttcaactatttctaccacagggagacggagcatgaggagcagttc
acgtacacccatgtaacatgtggtcagcagcagccctcgtttggcgaattcaaaaacagt
gacagcaaaccttcactctccaaatcagactacctggagagtgacgacgcagattcgatt
aaatacacgaattgcagtcctcataaagcgtacacgggaaagctaactgatgtatga
DBGET
integrated database retrieval system
