Clupea harengus (Atlantic herring): 105912440
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Entry
105912440 CDS
T09045
Symbol
clpb
Name
(RefSeq) caseinolytic peptidase B protein homolog isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
char03110
]
105912440 (clpb)
Chaperones and folding catalysts [BR:
char03110
]
Heat shock proteins
HSP100
105912440 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
Ank_5
Ank_4
AAA_5
ClpB_D2-small
AAA
Sigma54_activat
Zeta_toxin
AAA_22
Torsin
bpMoxR
AAA_3
AAA_24
nSTAND3
AAA_16
YchF-GTPase_C
NACHT
RNA_helicase
ATPase_2
ABC_tran
SRP54
RuvB_N
NB-ARC
Motif
Other DBs
NCBI-GeneID:
105912440
NCBI-ProteinID:
XP_031429925
UniProt:
A0A6P8G2C7
LinkDB
All DBs
Position
9:29245346..29282542
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AA seq
676 aa
AA seq
DB search
MLLSSVPQRMLMRRSRSLSPCRVLQTTGADSSCSTGRHGLREVVDANRNPLVSTSRVSRK
GILSEEASSTNVTPHVQYHHLATRWLTNLQGRRNSWAALASRGRENNYWDGAGGRESRSS
RAASAGVLSAAALAFCLKKDSDSKGGSLLQAARTSSSQEVLRLLAEGADVNHRHKLGWTP
LMVAAMNRQHNVVKVLLEKGADPNLGDDFSNVYEVSREKSIHSLEVLVSREDEFSSRLSS
RANFRGCSPLHYAVLADDLTTVNMLLEAGADPLQSNSQGHKPAQYAKDGPLQDLLKEWEG
KFVEARQKREAQERRRFPLERRLKEHIIGQEGAINTVAAAIRRKENGWYDEEHPLVFLFL
GSSGIGKTELAKQVARYMHKDIKKGFIRVDMSEFQEKHEVAKLIGSPPGYVGHDEGGQLT
KRLKECPNAVVLFDEVDKAHPDVLTVMLQLFDEGRLTDGKGKTIECKDAVFIMTSNVASE
DIAQHALHLRKEAQEQSRRRLAEKLEEVQKSSDVTISKQFKEEVIRPILKSHFRRDEFLG
RINEIVYFLPFCHAELIQLVSKELTFWAKKAKQRHNITLLWDRPVLDLLAGGYNLHYGAR
SIKHEVERCVVNQLAAAYEQELLPKGCTLRLCVDTPLEEEGGAGPTLKLEVVGDDSSTRP
LHIRPPLNPDPMGFAH
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtcatccgtaccacagcgcatgctgatgcgaaggtcgcgcagcctgtcaccg
tgtcgcgtgctgcaaacgaccggagccgactcgtcttgctccacaggacgtcatggtttg
cgcgaggtagtggatgccaatcggaatcccctcgtgtccacgtctcgagtgtcgaggaag
ggcattttgagcgaggaggctagctccacgaatgtgaccccgcacgtgcaataccaccac
ctcgccacgcggtggctaaccaacctgcagggccgccggaattcgtgggctgcgctcgcc
agcagagggcgcgagaataactactgggatggagcgggcggaagagaaagccgctcgtca
cgggccgcgagcgcaggggtgctgtcggccgccgcactcgcgttctgcctgaagaaagac
tcagactccaaaggtggatcccttctgcaggctgcaaggaccagcagttctcaggaagtc
ctcaggttattggctgaaggagctgatgttaatcatcgtcataaattgggctggacacca
ctcatggtggctgctatgaaccgacaacacaatgtggtgaaggtgttgctggaaaagggg
gcggatcctaacctgggcgatgacttcagtaatgtgtatgaagtctcccgtgagaagagc
atccattctcttgaggtcctggtgagtcgtgaggatgagttcagcagtcgtctgagctcc
agggcaaacttcagaggctgctcccctctccactacgccgtcctggccgacgacctcacc
accgtcaacatgctgctggaggcaggtgctgaccccctccagtccaacagccaggggcac
aagccagcgcagtacgccaaggacggcccactacaggacctgctcaaggagtgggaaggc
aagtttgttgaggctcgtcagaagcgggaggcgcaggagaggaggcggttccctctggag
cgacgactgaaggagcacatcattggccaggagggagccatcaacaccgtagctgcagcc
atcaggaggaaggaaaatgggtggtatgatgaagagcatccactggtcttcctcttcctc
ggctcctctggcattggtaagacagaactggcaaaacaggtggctcggtacatgcacaaa
gacatcaagaagggttttatacgggtggacatgtccgaatttcaggaaaaacatgaggtg
gctaagttgattggctctccccctggttatgtgggccatgacgagggtggtcagctgacc
aagcgtctgaaggagtgtcccaacgccgtggttctgtttgacgaggtcgacaaggcccac
cccgacgtcctcaccgtcatgttgcagctctttgacgaggggaggctcaccgatggtaag
gggaagaccatagagtgtaaggacgctgtcttcatcatgacgtctaatgtggccagtgag
gatattgcccagcatgctttgcacctgcggaaagaagcccaagaacagagccgacgacgt
ctggctgaaaaactggaggaggttcagaagagcagtgacgtcaccatctccaagcagttt
aaagaagaggtcatacgtccaattctgaagagtcatttccgtagggatgagtttctgggg
cggatcaatgagattgtttacttcctccctttctgccacgccgaactcattcagctcgtc
agcaaggagctcaccttctgggccaagaaggcgaagcagaggcacaacatcacactgctg
tgggatcggccagtgctggacctgttggcagggggctacaacctgcactacggggctcgc
tccattaaacacgaggtcgagcgctgtgtggtgaaccagttggccgccgcctatgagcag
gagctcctccccaaaggctgcacgctccgcctctgtgtcgatacgccattggaggaggag
ggaggggcggggcctacactcaaactggaggtggtgggggacgacagctcgacacgccca
ctgcacatacgaccccccctcaacccagaccccatgggcttcgcacactaa
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