Clupea harengus (Atlantic herring): 105912454
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Entry
105912454 CDS
T09045
Symbol
six3a
Name
(RefSeq) homeobox protein SIX3a
KO
K19473
homeobox protein SIX3/6
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105912454 (six3a)
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
105912454 (six3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
105912454
NCBI-ProteinID:
XP_012696871
Ensembl:
ENSCHAG00000018762
UniProt:
A0A6P3WEX2
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Position
13:complement(17223313..17226961)
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AA seq
294 aa
AA seq
DB search
MVFRSPLELYPSHFFLPNFADRPLLLASSAPSTRSPEDLSMFQLPTLNFSPEQVASVCET
LEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFT
KDSHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTR
SLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGQN
GMRSLSESGCTPHSSAESPSTAASPTTSVSSMTERVDTGTSILSVTSSDSECDV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcagatcccctttagagctttatccctcccatttcttcctgccaaacttcgct
gatcgccctctgctcttggcgagcagcgcgcccagcaccaggtctccagaagacttgtca
atgtttcagctaccgaccctcaacttctcgccggagcaagtggcgagcgtctgcgagacg
ctagaggaaaccggagacattgagcggctgggacgcttcctgtggtctctgccggtggca
ccgggagcctgcgaagcgatcaacaaacatgaatccatcctccgcgctcgtgccgtggtt
gccttccacacagggaatttccgagacctctatcacatcttggagaaccacaagtttacc
aaggactcacacggcaaacttcaggccatgtggctggaggcgcactaccaggaggccgag
aaactgcgcggtcgtcccctaggaccagttgataagtatcgggtgcggaagaagttcccg
ctcccccggaccatctgggacggagagcagaagacgcattgtttcaaagagcggacgcga
agtctgttaagggagtggtacctacaggatccgtacccgaaccccagcaagaaaagggaa
ctggcgcaagccactggactgacacctacacaggtcgggaattggtttaaaaaccggagg
caaagagacagagccgcagcagccaaaaacaggctccaacaccaagcaataggacagaac
ggtatgcggtccctttcagagtccggctgcactccacacagctcggcggaatcgccatcc
accgcggccagtccaaccaccagcgtgtccagtatgacagaacgagtcgacactggcacg
tccattctctcagttacatccagtgactcggagtgcgatgtatga
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