Clupea harengus (Atlantic herring): 105912482
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Entry
105912482 CDS
T09045
Symbol
wdr44
Name
(RefSeq) WD repeat-containing protein 44 isoform X1
KO
K20241
WD repeat-containing protein 44
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105912482 (wdr44)
Membrane trafficking [BR:
char04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
105912482 (wdr44)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
105912482
NCBI-ProteinID:
XP_012696913
Ensembl:
ENSCHAG00000025750
UniProt:
A0A6P3WF90
LinkDB
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Position
8:15579994..15598874
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AA seq
934 aa
AA seq
DB search
MASDTSDTEEFYDAAEDVNFTPSPNVSPAKFVLPTPQGVKDSLVQEVASGLALPESRNDD
SLKIIDSIIEESQKDNGGDEGLLRSDQGDNERKTEERQGAEDQMASAASVSNQMPEVLSG
VALVPAASHSDQMARVPEQEQEVSAQEDVGVLAVEAPGASIFAGPSATQKLAPAPTPLPP
DITSALGGRDTGAESFCAGGGETEPRPADILEQVPLADKMPQDQDQDEDQDPSGPTKPPR
QFTVEPDIVASTKKAPPSRPPPPGGAPPPRPPPPTRPTLPPSKKSQEAMRPTALAVSTEP
VEEPCGLVSPSSTVRSLTKELQHSLDLASATSGEKLVTTQENGEQGSGPSGSETPGPQRP
RSDSGRELTDEEILASVMIKNLDTGEEIPLIQAEEKLPTGINPLTLHIMRRTKEYITNDA
AQSDDDDKASAASTDPDAGKLKQKTTQLKKFLGKSVKRAKHLAGEYGEKAVSKVKSVRDE
VFHTDQDDPSSSDDEGMPYTRPAKFKAAHSFKGPFDFDQIKVVQDLSGEHMGAVWTMKFS
HCGRLLATAGQDNMVRIWVLKNAFDFFNNMRAKYNTEGRVSPSPSQESLCSSKSDTEGAM
GSGASEDPDMEDRNAPFRQVPFCKYKGHTADLLDLSWSKNYFLLSSSMDKTVRLWHISRR
ECLCCFQHIDFVTAIAFHPRDDRYFLSGSLDGKLRLWNIPDKKVALWNEVDGQTRLITAA
NFCQNGKYAVIGTYDGRCIFYDTERLKYHTQIHVRSTRGRNRVGRKITGIEPLPGENKIL
VTSNDSRIRLYDLRDLSLSMKYKGYVNSSSQIKASFSHDYSFIVSGSEDKYVYIWSTYHD
LSKFTSVRRDRNDFWEGIKAHNAVVTSAIFAPHPGLIVPQEAGCSEKPDPEVKSTDSGDS
ETIPSGALKTDHTEVLLSADFTGAIKVFTNVKKY
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggacaccagtgatacagaagaattctacgatgctgcagaagatgtcaatttt
accccctctccaaatgtttcgcctgcaaagttcgtccttcccactcctcagggtgttaag
gatagcctggtccaggaggtagcgtcaggtttggccctaccagagtctcgtaatgacgac
tccctaaagatcattgacagcataattgaggagagccaaaaggacaatggaggggatgag
ggtctgctccgcagtgatcagggggacaatgagaggaagactgaagagaggcaaggggct
gaagaccagatggcatcagcagccagcgtgtccaatcagatgcctgaggtcctctcaggg
gtggcactagtgcctgcagctagccattcagatcagatggctagggtgccggagcaggaa
caggaagtaagcgcacaggaagatgttggcgtgctagcggtggaggctccgggtgcgtcc
atctttgcagggccgtcggccactcagaagctcgcccctgctccgacgccactccctccg
gatatcaccagtgccctcgggggacgagacaccggggctgagtcattctgtgctgggggg
ggtgaaacggagcccagaccggccgatatcctggaacaggttcctcttgcagacaaaatg
cctcaggaccaggaccaggacgaggaccaggacccttcggggcccaccaaaccccccagg
caattcacggtggagcctgacattgtggccagcaccaagaaggcgccaccctccagaccg
cctcctccgggtggagccccgccccctcggccgcctccacccacacgtcccaccctccca
cccagtaagaagtcccaggaggccatgcggccaactgcgttagcagtttccacagagcca
gtggaagagccctgtggcttggtgtctcccagctcgacggtacgctccctcaccaaggag
ctacagcactctctggacctcgctagcgccaccagtggagagaaactcgtcaccacacag
gaaaatggcgagcaggggtcaggtccaagcggtagtgagactccaggaccacagaggccg
cgctccgactcgggccgagagctcactgatgaggaaatcctggcgagtgtgatgataaag
aacctggacactggtgaagagatccctctgatccaggctgaggagaagctccccaccggc
atcaatcccctcaccctgcacatcatgaggaggaccaaggagtacatcacgaacgacgca
gcgcagtcggacgatgatgacaaggcctctgccgcctcgacggacccagacgcaggaaag
ctgaagcagaaaaccacgcagctgaagaagttcctgggcaagtccgtaaagcgggcaaag
cacctggcaggggagtacggggagaaggcggtgagcaaggtgaagagcgtgcgggacgag
gtcttccacaccgaccaggacgacccgtcctccagcgatgacgagggcatgccctacacg
cggcccgccaagttcaaggccgcgcacagcttcaaagggcccttcgacttcgaccagatc
aaagtggtgcaggacctgagcggggagcacatgggagctgtgtggacgatgaagttttcc
cactgtggccggttgctggccactgcagggcaggataacatggtcaggatctgggttctc
aagaacgcctttgactttttcaacaacatgagagccaaatacaacacagagggtcgtgtg
tcaccttctccgtcccaggagagtctgtgttcctccaagtctgacacggagggagcaatg
ggaagtggggcttcggaggaccccgacatggaggacaggaatgctcccttccggcaagtt
ccattctgcaaatacaaaggacacacagctgacctgctggatctgtcctggtcaaagaac
tacttcctgctgtcttcgtccatggataagacggtgcgcctgtggcacatatccagacgg
gagtgcctctgctgcttccagcacatagactttgtcacagccatcgcatttcaccccagg
gatgaccgatacttcttgagcggctctctggacggtaagctgcggctgtggaatattcca
gataagaaggtggcactgtggaacgaggtggatggccagaccaggctcatcactgcagcc
aacttctgccagaatggcaaatacgctgtcatcggcacctacgacggtcgttgcatcttc
tatgacacagagcggctgaagtaccatacacagatccatgtgcgatccaccaggggcagg
aaccgtgtgggccgcaagatcacgggcattgagcctctgccaggggagaacaagatcctg
gtgacgtccaatgactcccgcattcgcctgtatgacttgagggatctctctctgtccatg
aagtacaagggctatgtcaacagcagcagccagatcaaagccagcttcagccatgattac
tccttcatcgtcagtggctcagaggacaagtatgtgtatatctggagcacgtaccacgac
ctcagcaagttcacctccgtcaggcgcgaccgcaatgacttctgggaaggcatcaaagcc
cacaatgcagtggtgacgtcggccatctttgcgccccacccggggcttatcgtgccacag
gaggcagggtgcagcgaaaagcctgacccggaggtcaagagcaccgactcaggcgactca
gagaccattccctcaggagccctgaaaacagaccacaccgaagtcctcctctctgcagac
ttcaccggcgccatcaaagtctttaccaatgtcaagaagtactga
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