Clupea harengus (Atlantic herring): 105912556
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Entry
105912556 CDS
T09045
Symbol
shank3a
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
char
Clupea harengus (Atlantic herring)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
Ank_3
Ank_5
PDZ_6
SH3_2
PDZ
SH3_9
FERM_f0
Motif
Other DBs
NCBI-GeneID:
105912556
NCBI-ProteinID:
XP_042559802
Ensembl:
ENSCHAG00000008521
UniProt:
A0A8M1K7I7
LinkDB
All DBs
Position
3:14510177..14812051
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AA seq
2032 aa
AA seq
DB search
MPVSPPAGKHEPPRTPQQQEQQQQQQPPPPHTHARTHTHAHTLAILPLPPPPYCQTNGRQ
GDSADGSHDDDGRRARAGLMEELPSNTAVVRIGIPDLQQTKCMKFNVEAPIWLSKQRILC
TLNQSLKDVLNYGLFLPAHNGKAGKFLDEERMLADYPLPSVTPLPYLEFRYKRRVYTQTH
LEDKQLAKLHTKANLKKFMEYVQQRNIEKVSKFLERGLDPNFHDPESGECPLSMAAQLEG
CAELIKVLKSGGAHLDFRTREGVTALHKAVRTKNHTALITLLDLGASPDYKDSRGLTPLY
HSAMVGGDPYCCELLLHDHAQVGCVDENGWQEIHQACRHGHVQHLEHLLFYGADMSIQNA
SGNTALHVCALYNQDSCTRVLLFRGANKEIKNYNSQSAFQVAIIAGNFDLAEIIKNHKSS
DVVPFRETPSYTNRRRVMGTLTSPRSLLSRSTSDNNLNGDGGGHHPAHSPVPSLRSLPPL
AQPPPGVGPDPAADGSSLQSTGSSRSSHTHTHTRSPSLQRVSEEPDKHTLRRLPHGHSRG
RLSPGTVQRDPSPPPPVPVALAGARGPKRKLYSAVPGRTFIVVKPYAPQGEGEIQLNRGE
RVKDSYINQVEDENLYEEIYQDANDDDDEAKAREEEEEEDYYDQMSDDGVLSIGEGGFWE
GTVKGRTGWFPAECVEEVQLRQYDPRLETREDRTKRLFRHYTVGSYDNFTSYSDYIIEEK
EAMLQKRDSEGFGFVLRGAKAETPIEEFSPTPAFPALQYLESVDVEGVAWTAGLRTGDFL
IEVNGVNVVKVGHKQVVSLIRQGGNSLVMKVVSVSRKPESEDTVRKKAPPPPKRAPSTTL
TLRSKSMTAELEELASARRRRGERLDEMLASQEASLRPQVEAEYRTATVKQRPTSRRITP
AEISSLFERQGLALHGALHPGLDRHMHLSKGMSRTKSFGATEEDRLSALAAEHRFPRSSS
MTDTLRESHHGIPPPPQTAPPPPPSLYYLDTGPPPSFCPPPPPGRLHDPSRSSFRPGSEP
RLHGIGLPPGAVISSYGSTPTFTPTFARSSTSPGPPHHAPLLTERQRKAHSMILLQDSSL
LPVDPAHLPRPSLAQATPSEKMKRKGGRVLDNPYANVGQFSLGLFTPPPPSKPQRRKSPL
VKQLQVEDSIQERASLALASAHGHHRELSPTGRLAAHHSSRMEYYQQQLAAQEAALLQGR
GPFAAAIAGAVKDRERRLEERRKSTVFLSVGTMEGSGMTGAEQGAPDVPSLIQSRSVDER
MLTREQAPLPPPAMPLRPSAPGGTTFIHPLTGKPLDPNSPLALALAARERALSSQCQSPS
SSPEPRTTPHEQQGALFHTEHTHTKETELRGGGAGGEGGRDSPSSFYPTASKVQWASPTS
LRREMEGRREERREERREERSPAEDKKSLLISIMDTSQQKTAGLVMVHATSNGQAVGLAP
DQPVRVPPADSKPAPSSPSPDATAAAAGTTTPTLTPTPTPTPTDTPMPTPTPQRPPSPAS
DKTLAQGSSEEDMDAYGNVALPAAILSSSDEETREELRKIGVVPPPNEFANGLLPKDQPV
PAATPTATASPMATIPPPAKTPITPAAPPLPPVPLAPVAIAAALAGKAPTPTPSTATAVS
GKPLEGQLVADSSAADSGVEEVDTRSSSDHHLETTSTISTVSSMSTLSSESGEPTDTTYS
SHADGHTFVLDKPPVPPKPKLKSQLSKGPVTFRDPLLKQSSDSELLSQQQAAALAAAAAS
ASSSSGLGLGLSLGLGLGTSRPRYLFQRRSKLWGDGGGGEARASSPGSPGGSEEGKPTVI
SELSSRLQQLNKDTRSLGEEPLGAPGGALDPGRKSPVAGARLFSSLGELHTISQRSYGTT
YTIRPGSRYPVTRRTPSPGGGGSPDRSDPLAPLRGYGLATSPPPSAASTPHTILKSSSLS
LPHESKEVRFVMRSSSARSRSPSPAPSPAPLGSPLLALRPFHQKPLQLWNKYDVGDWLES
INLGEHRQRFQEHEIEGSHLPALTKDDFAELGVTRVGHRMNIERALRQLLES
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgagtccgccggccggcaaacatgaacccccccgaactcctcagcagcaggag
cagcagcagcagcagcagcctccccccccacacacacacgcacgcacacacacacacgca
cacacactcgctatcctgccgctgccgccgccgccgtactgccaaaccaacggcagacag
ggggacagtgcagacggttcccacgacgacgacggtcgccgcgcgcgggccgggctgatg
gaggagttgccgagcaacacggcggtggtccgcatcgggatccccgacctgcagcagacg
aaatgcatgaagtttaacgtggaggctcccatctggctgtcgaagcagcgcatcctgtgc
acgctcaaccagagtctgaaggacgtgctcaactacggcctcttcctgcccgcccacaat
ggcaaggccggcaagttcctggacgaggagcgcatgctggcggactaccccctcccctca
gtcacccccctgccctacctggagtttcgctacaagaggcgtgtgtacacccagacgcac
ctggaagacaagcagctggctaaactccacactaaggcgaacttgaagaagttcatggag
tatgttcaacagcggaacattgagaaggtgtccaagtttctggagcgagggctagaccca
aacttccacgacccggagtcaggagagtgtcccctaagcatggcggcccagctggagggg
tgtgctgagctcatcaaggtgctgaagagtggaggagcccacctggacttcaggacaaga
gagggggtcacggcactgcacaaggcagtccgcaccaagaaccacaccgctcttattact
ctgctggatctgggtgcgtctccggactataaggacagccgtggcctgacccccctgtac
cacagcgccatggtggggggcgacccctactgctgcgagctgctgctgcacgaccacgcc
caggtgggctgtgtggacgagaacggctggcaggagatacaccaggcttgtcgccatggc
cacgtgcagcacctggagcacctgctgttttatggagccgatatgagcatccagaacgcc
tcggggaatactgccctccacgtgtgtgctctttacaaccaggatagctgtaccagggtt
ttactcttcagaggagccaacaaagagatcaaaaactacaacagccaatctgcattccag
gtggcgatcattgctgggaattttgatctggcggaaattattaagaatcacaaatcatca
gatgttgtgcctttcagggaaaccccgtcttacaccaaccggcggcgagtgatgggcacc
ctgacctccccccgctcgctcctctcccgctccacctccgacaacaacctgaacggggac
ggcggcgggcaccacccggcacactcgcccgtgccctcgctgcggagcctcccgcccctg
gcccagccgccgcccggggtcggaccggaccccgccgctgacggcagcagcctccaaagc
accggcagctcacgctcctcgcacacgcacacacacacgcgctcgccctccctgcagcgc
gtctcagaggaacccgacaagcacacgctgcgccggctgccacacgggcacagccgcgga
cgcctcagccctgggacggtccagcgggaccccagcccgcctcccccggtccccgtcgcc
ctggcgggggcccggggccccaaacggaaactttacagcgccgtgccgggccgcaccttc
atcgtggtgaagccgtatgcgccgcagggggagggcgagatccagctgaaccgcggcgag
agagtcaaagacagctacattaaccaggtagaagatgagaacctgtatgaggagatatat
caggacgccaatgatgatgatgatgaggctaaagctcgagaggaggaggaggaggaggat
tattatgatcagatgagtgatgacggagtgttgagtattggagaaggaggattctgggaa
ggcacagtgaagggcagaactggctggtttccagcggagtgtgtggaggaggtgcagctg
aggcagtatgacccacgactagaaacccgagaagaccgcactaagaggctgttcagacac
tacactgtgggctcatacgacaacttcacttcatacagcgactacatcatcgaggagaaa
gaggccatgctgcagaagagggacagcgaagggttcgggttcgtgctgcgaggagcgaaa
gctgagacgcccatagaggagttctcccccacccctgccttccctgccttacagtacctg
gagtcggtggatgtggagggcgtggcctggacggcagggcttcgcaccggggacttcctt
atagaggtgaacggggtgaatgtggtcaaggtggggcacaagcaggtggtgtcactcatc
cgtcaggggggcaacagcctggtcatgaaggtggtgtccgtcagccgcaagcccgagtcc
gaggacacggtgcgcaagaaagcccccccgccccctaagcgagccccaagcacgactctc
acactccgctccaaaagcatgactgctgaactggaggaactggcctcagctaggaggagg
agaggagaaaggctcgatgaaatgctggcatctcaggaggccagcctaaggcctcaggtg
gaggcagagtacagaacagcaaccgtcaagcagagaccaaccagccgccgtatcacacca
gcagagattagttcccttttcgagcggcaaggtttggctctgcatggagcgctgcacccc
ggcctggacagacatatgcacctgtctaaaggcatgtcccgcaccaagagcttcggagca
acggaggaggatcgtttatcagcactggcggcagagcaccggtttccacggagctcgtcg
atgacggacacactgagagaatcccaccatggcatcccgccccctccccagacggccccc
cctccccctccctccctctactacctagacacgggccctcccccctccttctgccccccg
ccccccccggggcgactccacgacccctcccgctccagcttccgccccggctccgagccc
cgcctccacggcatcggcctgcccccaggggcggtgattagcagctatggctccaccccc
accttcacccccaccttcgctcgctcctccacctccccgggcccccctcaccacgcgccc
ctcctgacggagcgccagaggaaagcccactccatgatcctgctgcaggactcctccctc
ctgcccgtggaccccgcccacctgccccgcccctcgctggcccaggccacgccctcggag
aagatgaagcgcaagggggggcgcgtgcttgacaacccgtacgccaacgtgggccagttc
agcctgggcctcttcacccccccgcccccctccaaaccgcagcgcaggaagagcccgctg
gtcaagcagctgcaggtggaagactctatccaggagcgggcatcgctggcgctggcctcg
gcgcacgggcaccaccgggagctgtcgcccacgggcaggctggcagcgcaccactccagc
aggatggagtactaccagcagcagctggctgcacaggaggccgcactactgcaggggcgg
ggcccgtttgcggcggccatcgccggagcggtgaaggaccgcgagcgccggctggaggag
cggcgcaagtccaccgttttcctgtccgtgggcacaatggagggcagcggcatgacgggc
gcggagcagggggcgcccgacgtgccctcgctcatccagtcgcgctccgtggacgagcgc
atgctgacccgcgagcaggcgcccctgcccccgcccgccatgccactgcgcccctccgcg
ccgggcggcaccaccttcatccaccccctcactggcaaacccctggacccaaactccccg
ctggctcttgcgctggccgcaagggagcgggcgctgagctcccagtgccagtcgccctcc
agcagcccggagcccaggactacgccacacgagcagcagggggcgctgtttcacaccgag
cacacacacaccaaagagactgagctgagggggggtggggcgggaggggagggggggcga
gactcgccctcgtccttttaccccacggccagtaaggtgcagtgggcgtcgcccacgtcg
ctgcggagggagatggaggggaggagggaggagcggagggaggagaggagggaggagcgc
tcgcccgcggaggacaagaagagcctgctgatcagcatcatggacacgtcgcagcagaag
accgcgggcctcgtcatggtccacgccaccagcaacggccaggccgtgggtctggcgccg
gaccagcctgtccgagtcccgcccgccgattccaaacccgctccgtcgtccccaagtcca
gatgccaccgccgccgctgcgggaaccactaccccgaccctgacccccacccccaccccc
acccccaccgacacgcccatgcccacgcccaccccccagcgcccgcccagcccggcctct
gataagacgctggcgcagggcagctcggaggaggacatggacgcctacggcaacgtggcg
ctgccggccgccattctgtcctccagtgacgaggagacgcgcgaggagctgcgcaagatc
ggcgtggtgccgccacccaacgagttcgccaacggcctccttcccaaagaccagcccgtt
cccgccgccacgcccacagccacggcatcgcccatggcaaccatacctcccccagccaag
acccccatcacccctgcagcgcctccccttcctcctgtccccctggcccctgttgccata
gcagcagcactcgcgggcaaggcccccacccccaccccctccaccgccaccgccgtctca
gggaagcctctggaaggccagctggtggcggactcgtcggcggcggactcgggcgtggag
gaggtggacacgcgcagctccagcgaccaccacctggagaccacgagcaccatctccacg
gtgtccagcatgtccacgctgtcctcggagagcggcgagcccaccgacaccacctacagc
tcccacgccgacgggcacaccttcgtgctcgacaagccgccagtgcctcccaagccaaag
ctcaagtcccagctgagcaaggggcccgtgaccttcagggacccgctgctcaagcagtcc
tccgacagcgagctgctctcccagcagcaagccgccgcgctggccgccgccgccgcatcc
gcatcctcctcctccggcctggggctcggcctgagcctgggcttgggcctgggcaccagc
cggccccgctacctcttccagagacgctcgaagctgtggggggacggtggcggcggggag
gcgcgcgccagcagccccggcagccccggcggctccgaggagggcaagcccactgtgatc
agcgagctcagctcacgcctgcagcagctcaacaaggacacgcgctcgctgggcgaggag
ccgctgggggcgcccgggggggccctcgaccctggcaggaagtcgcccgtcgccggtgcc
agactcttcagcagtttaggagagctccacaccatctcccagcggagctacggcaccacc
tacaccatccgccccggcagccgttacccggtcacgcgccgcacgcccagccccggcggg
gggggctccccggaccgctccgacccgctggcgccgctgcgggggtacggcctcgccacc
tcgccgcccccctccgccgcctccaccccccacaccatcctcaagtcgtccagcctgtcc
ctgccgcacgagtccaaggaggtgcgcttcgtgatgcggagctccagcgcacgcagccgc
tcgccgtcccccgcgccgtcccccgccccgctgggctccccgctcctcgccctgcggccc
ttccaccagaagccgctgcagctgtggaacaagtacgacgtgggcgactggctggagagc
atcaacctgggcgagcaccgccagcgcttccaggagcacgagatcgagggctcgcacctg
cccgcgctcaccaaggacgacttcgccgagctgggcgtcacgcgcgtcggacatcgcatg
aacatcgagcgcgcgctccgacagctgctggagagttga
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