Clupea harengus (Atlantic herring): 105912610
Help
Entry
105912610 CDS
T09045
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
105912610
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105912610
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105912610
Ion channels [BR:
char04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
105912610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
TMEM138
DUF1327
Claudin_2
Motif
Other DBs
NCBI-GeneID:
105912610
NCBI-ProteinID:
XP_012697046
Ensembl:
ENSCHAG00000008775
UniProt:
A0A6P3WF12
LinkDB
All DBs
Position
21:24324944..24334783
Genome browser
AA seq
461 aa
AA seq
DB search
MDCSWMLRHVSFAFLLLFVGRGLCSNDETRLVKDLFKDYNKVVRPVNHFKDSVVVTVGLQ
LIQLISVDEVNQIVTSNVRLKQRWKDVNLLWNPDDYGGIKKIRIPCTDIWRPDLVLYNNA
DGDFAIVHETKVLLEHTGLVTWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGLLV
VINPDSDRPDLSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIV
NVIIPCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGK
YMLFTMVFVIASIIITVIVINTHHRSPSTHTMPQWVRTVFIDTIPNLMYFSTMKRPSEER
RDKQIFQNDIDISEISGKLGPTSVTYQSPIIKNPDVKSAIEGVKYIAETMKGDEESNNAS
EEWKFVAMVMDHILLCVFMAVCIIGTMGVFAGRLIELHMQG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggattgctcctggatgcttcgccacgtctcattcgcttttctgttgttatttgttggc
cgcggtctgtgttctaacgatgagacccggctggtgaaggacctgttcaaagactacaac
aaagtggttcggcccgtcaaccatttcaaagattctgtggtggtgaccgtggggctgcaa
ctcattcagctcatcagtgtggatgaagtgaatcagattgtcaccagcaacgtacggctt
aagcagcgctggaaggatgtcaatctgctgtggaatcctgatgattatggcggcattaag
aaaatacgtatcccctgcactgatatctggagacctgacttggtactctataacaatgca
gacggtgactttgccattgttcacgagaccaaggttcttctggagcacacaggcctggtg
acgtggaaccctccggccatctttaagagctactgtgagatcatcgtgctccacttcccc
ttcgacctgcagaactgcagcatgaagctcggcacctggacctacgacggcctgctggtg
gtcatcaacccggacagtgaccgtccggacctgagtaacttcatggagagtggggagtgg
gtgatgaaggactaccgcagctggaagcactgggtctactatgcctgttgcccggatacg
ccctacctggacatcacctaccacttcctcatgctcagactgccgctgtacttcatcgtc
aacgtcatcattccctgcatgctcttcagcttcctcactggactagtgttctacctgccc
accgactcaggtgagaagatgaccctgagtatctccgtcctgctgtctctgactgtgttc
ctgctggtgatcgtggagctcatcccctccacgtccagcgctgtgcccctgatcgggaag
tacatgctcttcaccatggtcttcgtcatcgcctccatcatcatcaccgtcatcgtcatc
aacacacaccaccgatcccccagcacacacaccatgccacagtgggtccgcacggtcttc
atcgacaccattcccaacctcatgtacttctccaccatgaagcgtccctctgaggagcgt
cgggacaagcagatcttccagaatgacatcgacatctcggaaatctccggaaagctgggg
cccacctccgtcacctaccagtcacccattatcaagaatcccgacgtcaagagcgccata
gaaggcgtcaagtacatcgcagagaccatgaagggcgacgaagagtccaacaacgcttcg
gaggagtggaagttcgttgccatggtgatggaccacattctgctgtgtgtgttcatggct
gtgtgtatcatcgggacaatgggtgtgtttgccggtcgtctgatcgagctgcacatgcag
ggttga
DBGET
integrated database retrieval system
