Clupea harengus (Atlantic herring): 105912620
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Entry
105912620 CDS
T09045
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
KO
K10740
replication factor A3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03030
DNA replication
char03420
Nucleotide excision repair
char03430
Mismatch repair
char03440
Homologous recombination
char03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105912620 (rpa3)
03420 Nucleotide excision repair
105912620 (rpa3)
03430 Mismatch repair
105912620 (rpa3)
03440 Homologous recombination
105912620 (rpa3)
03460 Fanconi anemia pathway
105912620 (rpa3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105912620 (rpa3)
03400 DNA repair and recombination proteins [BR:
char03400
]
105912620 (rpa3)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105912620 (rpa3)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105912620 (rpa3)
MMR (mismatch excision repair)
105912620 (rpa3)
DSBR (double strand breaks repair)
HR (homologous recombination)
105912620 (rpa3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_3
Motif
Other DBs
NCBI-GeneID:
105912620
NCBI-ProteinID:
XP_031441588
UniProt:
A0A6P8GSF5
LinkDB
All DBs
Position
19:481337..484205
Genome browser
AA seq
133 aa
AA seq
DB search
MFLPRTRGKKTHSQQRNMSGVFESPKPRINASMLSQHVNRPVCLTGRVEKVHPSGKSFTL
TDGEGKTVSVELNDPLDEELSGIVEVVGMVSNKGAVMATAYTALREEKIPFDLELYNEAL
KVVHDFPQYYPFQ
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcccgcgaactaggggaaaaaagacacacagccagcaaagaaacatgtcaggt
gtattcgagtctcccaaacccaggataaatgcatctatgctgtctcagcatgtgaaccgg
ccggtctgtttaacgggccgtgtagagaaggtccacccatcaggaaagtctttcacgcta
acagacggcgagggcaagactgtatccgtggagctgaatgacccactcgacgaggagctg
agtggaattgtggaggtggttggcatggtgtcaaacaaaggcgccgtcatggccactgcc
tacaccgccctccgagaggaaaaaataccctttgatttggagctctataacgaagctttg
aaagttgtccacgacttcccccagtactaccccttccaatag
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