KEGG   Clupea harengus (Atlantic herring): 105912664
Entry
105912664         CDS       T09045                                 
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5 isoform X1
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    105912664 (xrcc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    105912664 (xrcc5)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     105912664 (xrcc5)
SSDB
Motif
Pfam: Ku Ku_N Ku_PK_bind Ku_C VWA_2 VWA
Other DBs
NCBI-GeneID: 105912664
NCBI-ProteinID: XP_012697101
Ensembl: ENSCHAG00000026084
UniProt: A0A6P3WEX9
LinkDB
Position
2:9046538..9062483
AA seq 726 aa
MARTSKSALVLCMDVGFSMSNAAPGHEAPFEQAKKVIQKFVQRQVFAETKDELGLVLFGS
DNTKNPLATDGQYQNIAVHRHLMIPDFELLEEIQNDIHPGSQQADWLDALVVCMDLLQKE
TLGKKCDRLNIALLTDLNTQVCADQLDVIISNLKRAGITLQFFLPFPADADDPGEGGSDG
DGGARRHPHGKGLSREQQKGLEMVQQIMHSVDEESGMEEVHAFSDAIEKLSIFKHIERRP
MAWPCILTIGTSLSIRIVGYKAVTEEKVKKTWSVVDAQSNRRDDVKRDTVYCLHDDNETE
VQREDTIQGFRYGSDIVPFSKVDQEQMKYKSDGKSFSVLGFTKQSLINRHHFMGSQAIKV
FAARDDEHAAVALSALIRALDSTDMVAIVRYAYDRRSNPQVGAAFPCVKEKYECLIYVQL
PYMEDLRQFAFASLENNKKFSPTEDQLSAVDSLIDSMMLVEEKEDREKEDLFKVNHIPNP
QFQRLFQCLHERAVHPGAPLPPMEPWLKRVLEKPQALEARCHAPLEEVKKKFPLKVVVRK
KEQKTSADVFGNGKEEPDAKKAKGDEEEDYNLAEISEGNITSVGSVDPVKDFRALIRHKT
LPFGEVCQQLTLRIEQLLGNKSTPYYMKAITCILAFRDQSVKAATAELFNSYMQSLKRSI
PDRSLQEFWDLVSSDGLTLISKDEVEGSSVSKQEANQFLLLEEKMEEVETPAVVDTGDVD
DLLDMM
NT seq 2181 nt   +upstreamnt  +downstreamnt
atggcgcgaacaagcaagtcagcgctggtgctgtgtatggatgttgggttctccatgagc
aacgcagcccctggccatgaagcaccgtttgagcaagccaagaaagtcatacagaaattt
gttcaacgacaggtgtttgcagaaacgaaggatgagctgggccttgttctctttgggtca
gacaacactaaaaacccgctggccactgatggccagtaccagaacatcgccgtccatcga
cacctcatgatcccagactttgagctgctggaggagatccaaaatgacatacatccaggt
tctcaacaggcagattggttggatgcacttgtggtgtgtatggacctcctgcaaaaggaa
actctggggaagaagtgcgacaggttaaacattgccctgctcactgacctaaacacgcag
gtgtgtgctgatcagctggacgtcatcatcagcaacctgaagagggctggaatcacacta
cagttcttcctgccgttccctgcggacgcggatgatcctggagagggggggtcggatgga
gacggaggtgcccggcggcacccccacgggaaggggctctcgcgggagcagcagaagggg
ctggaaatggtgcagcagatcatgcactccgtggacgaggagagcggcatggaggaggtg
catgccttcagtgatgccattgagaagctgtccatcttcaagcacattgagaggagaccc
atggcctggccatgcatactcaccataggcacctccctgtccatccgcatcgtgggctac
aaggctgtcacagaggaaaaggtaaaaaagacgtggtccgtggtggacgcccagtccaac
aggcgagacgacgttaagagggacactgtctactgtctccatgacgacaacgagacagag
gtgcagagggaggataccatccagggtttccgatatgggagcgacattgttcctttctcc
aaggtggaccaggaacagatgaagtacaagtcggatggaaagtccttctctgttctcggc
ttcaccaaacagagcctgattaatcgccatcatttcatgggcagtcaggccatcaaggtc
ttcgcggccagggatgatgagcatgctgctgtcgccctgtcggccctgatccgcgcgctg
gacagcacggacatggtggccatcgtcaggtacgcctacgatcgccgtagcaacccccag
gtgggcgctgccttcccctgcgtcaaggagaagtacgagtgcctgatctacgtccagttg
ccctacatggaggatctgaggcagttcgccttcgcctcgctggagaacaacaagaagttt
tcacccacggaggatcagctgtcagcggtggactccctcattgactccatgatgctggtg
gaggagaaggaggacagagagaaggaggacctgtttaaagtcaaccacattcccaaccca
cagttccagagactcttccagtgtttgcacgagcgggcggtgcacccgggcgccccgctg
ccccccatggagccgtggctgaagcgagtcctggagaaaccccaggctctggaggcccgc
tgccatgccccgctggaggaggtgaagaagaagttccctctgaaggtggtggtgcgcaag
aaggagcagaagaccagtgcagacgtgttcgggaacgggaaagaggagccagatgctaag
aaggccaaaggggacgaggaggaagactacaatctggccgagatttcagagggcaacatc
acatctgtgggaagtgtggatccggtgaaagacttccgtgcacttattcgacacaagaca
cttcccttcggcgaggtctgccagcagctgaccctcagaatagagcagttgctgggcaac
aagagcacaccctactacatgaaggccatcacctgcatcctggccttcagggatcagtcc
gtcaaggctgcgacggctgaactcttcaacagctacatgcagtccctgaagagaagtatt
ccagacagaagcctccaggaattctgggatttagtctcctcagatggcctgactttgatc
agcaaagatgaagtggagggaagctctgtgtccaagcaggaggccaatcagttcctcctg
ttggaggagaagatggaggaggtggagactccagcggtggttgacacaggagacgtagat
gatctgctggacatgatgtga

DBGET integrated database retrieval system