Clupea harengus (Atlantic herring): 105912710
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Entry
105912710 CDS
T09045
Symbol
ddx19a
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X2
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105912710 (ddx19a)
03015 mRNA surveillance pathway
105912710 (ddx19a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105912710 (ddx19a)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105912710 (ddx19a)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105912710 (ddx19a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105912710
NCBI-ProteinID:
XP_012697151
Ensembl:
ENSCHAG00000027535
UniProt:
A0A6P3WF57
LinkDB
All DBs
Position
4:complement(4184929..4191685)
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AA seq
476 aa
AA seq
DB search
MATDSWALAVDEQEAAAESIGSLQIKEKRESVNGTVKPGEDGDKADEEEKEDRAAQSLLN
KLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENAL
PMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPANKWTQCLCVSPTYELALQTGKVIE
QMGQFYPEVKLAYAIRGNKIERGQKIQDQIVIGTPGTVLDWCLKLKFIDPKKIKVFVLDE
ADVMIATQGHQDQSIRIQRMLPKDCQMLLFSATFEESVWKFAERIVPDPNIIKLKREEET
LDTIKQYYVVCSNKEEKFSALCNIYGAITIAQAMIFCHTRKTASWLSGELSKEGHQVALL
SGEMTVEQRAAVIERFRQGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETY
LHRIGRTGRFGKRGLAINMVDSKHSMDILNTIQDHFSKKIEKLNTDDLDEIEKIAN
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgattcctgggccttggcagttgatgaacaagaagctgccgctgaatctatt
ggatccttgcagattaaagagaaacgagagtccgtaaatggaacagtgaaaccaggggaa
gatggtgacaaagctgatgaagaggagaaagaggacagggcagctcagtcattactgaat
aaactaatccggagcaatcttgtgaataccaccaaccaagttgaagttcttcaacgagat
cccaactctcctttgtactctgtaaaatcatttgaagagctgcgtctaaagcctcagttg
cttcagggggtttatgctatgggcttcaacagaccttccaaaattcaagagaatgccttg
ccaatgatgcttgctgaaccacctcaaaacctgattgcccaatcccagtctggtacaggt
aaaacagcagcctttgtgctagccatgctaagccatgttgacccagctaacaagtggact
cagtgtctctgtgtctcgccaacttatgaactagccttgcagaccggcaaagtcattgaa
caaatgggacagttctatcctgaagtgaaacttgcttatgctattcgaggcaataaaata
gaaagagggcagaagatacaggaccagatagtcattggtacccctggtactgtgctggac
tggtgcctaaaactcaagtttatcgacccaaagaagatcaaagtatttgtcctggatgaa
gcagatgtcatgattgcgacacaaggccaccaagaccagagcatccgtatccagagaatg
ctaccaaaggattgccaaatgctgctgttctctgccaccttcgaggaatctgtctggaag
tttgcagaaaggatcgtcccagatcccaacatcataaagctcaagcgtgaggaggagacc
ttagacactattaagcagtactatgtggtgtgcagcaataaggaggagaagttctctgcc
ctctgcaacatctacggggccatcaccatcgcacaggccatgatcttttgccacacccgt
aagacggcgagctggctgtcaggagagctgtcaaaagagggccaccaggtggcactcctc
agcggagagatgactgtggaacaaagggctgcggtcatcgagcgttttagacaaggaaag
gagaaagtcctcgtcacaaccaatgtgtgtgctagaggtattgatgtggaacaggtgtct
gtagtgatcaactttgaccttcctgtggacaaagatggcaatccagacaatgagacatat
ttgcacagaattggacgcacaggacgatttggcaagaggggccttgcaatcaacatggtt
gacagcaaacacagcatggacattctcaacacaatccaagatcacttcagtaagaagatt
gaaaaactgaacacagatgatcttgatgaaattgagaaaatcgccaactaa
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