Clupea harengus (Atlantic herring): 105912718
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Entry
105912718 CDS
T09045
Symbol
calcoco1a
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105912718 (calcoco1a)
04131 Membrane trafficking [BR:
char04131
]
105912718 (calcoco1a)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
105912718 (calcoco1a)
Membrane trafficking [BR:
char04131
]
Autophagy
ER-phagy
ER-phagy recepters
105912718 (calcoco1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Motif
Other DBs
NCBI-GeneID:
105912718
NCBI-ProteinID:
XP_012697162
Ensembl:
ENSCHAG00000026808
UniProt:
A0A6P3WFB2
LinkDB
All DBs
Position
4:complement(3709992..3722318)
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AA seq
654 aa
AA seq
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METAWKVEFRNVGSGYFPESRIECHYTISSQHIWASNDWIGLFKVGWASVKDYHTFVWAL
APAGYKEGSDVNCCVHFQASYLPKPNDHAYQFVYVDSKGEVGSRSTPFTFGAPKPLEDLV
TLEEGGQEDGAGEDMLMVIPRAELLQSRLQECLKERGELLQALEAADRIREREKDRSGRV
KESWERVRRQLERDLADLKEELGQSQEEVEEMKRKQEEVLASEEALAEEKSALLSKRAAS
EQRIRELEDDIKALSQRALERETEMERMKEKAKKVAAQRKEEENEQKSLQVKLEQTEAEL
RSLSAEFQGLRSSLAQRDTHALQLRDTICTLTHKLNTAHRKEAESEAALGELRSLQERLR
ASERAAEDLRGELSALAVKRDQNQAELHQARLQAAQLTLQLADSSLALREGRACWAQERE
SLQRTAEMDRTRMEKLLEQVQRREEMLQEERMEREKVEVELGREKDCNRVQLSETRRELQ
ELKASLRVAQKEKEQLQMEKQDVLDYARQLEQRLQAASDYNWGEMALLHSSIRPESPMSD
SEDEKPEALQPVRSSRPLAPYGLCEQPQPEPLLPATPPPSPRTLSREVAVVISQPAPLSS
PRPPASDTLAHSSESEEDCEAPQSGGNSSGEETALLLFDHIDPALSDLTDATMW
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccgcctggaaagtggagttccggaatgtcggcagcggctacttcccagagagc
cggattgaatgccattacaccatcagttcccagcacatctgggccagcaatgactggatt
ggactctttaaggtgggctgggcctctgtgaaggactaccatacctttgtctgggcattg
gcgccagctggctacaaggaagggagtgatgtcaactgttgtgtgcacttccaagcctcc
tacctgcccaaaccaaatgaccatgcctaccagtttgtgtacgtggacagtaaaggggag
gtgggctcccgaagcaccccgttcaccttcggcgcccccaagcctctggaggacctggtg
acgctggaggaggggggccaggaggatggggctggggaggacatgctgatggtcatcccc
agagctgagctcctgcagagtcgtcttcaggagtgcctgaaggagcgcggcgagctgctg
caggccctggaagccgcggacaggatcagagagagggagaaggataggagcggaagggtg
aaagagtcatgggagcgcgttcgtcgccaactcgagagggacctcgccgacctgaaggaa
gagctggggcagagccaggaggaggtggaggagatgaagaggaaacaggaggaagtgctg
gcctctgaagaagccctggctgaggaaaagagtgctctgctgagcaagagggcagccagt
gagcagcgcatcagagagctggaggacgacatcaaagcactctcacagagagccctggag
cgggagacggagatggagaggatgaaggaaaaggccaaaaaggtggcagcccagaggaag
gaagaagagaatgaacagaagagcctgcaggtcaagctggagcagacggaggccgagctg
cggagtctgtctgcagagtttcagggtctgcgcagctcgctggcccagagggacacgcac
gccctgcagctgagagacaccatctgcaccctcacacacaagctcaacactgctcacagg
aaagaggcggagagtgaggcggccctcggtgagctgcggagcctgcaggagcggctgcgg
gccagcgagcgcgctgccgaggacctgcgcggggagctgagcgcgctggccgtcaagcgg
gaccagaaccaggccgagctgcaccaggcccgtctgcaggccgcccagctcaccctgcag
ctggccgactccagcctggcgctccgcgagggccgcgcctgctgggcccaggagagggag
agtctgcagcgcacggcagagatggaccgaacccgcatggagaagctgctggagcaggtg
cagcgtcgggaggagatgctccaggaggagaggatggagcgcgagaaggtggaggtggag
ctgggccgagagaaggactgtaaccgggtgcagctgagcgagaccaggcgagagctgcaa
gagctgaaggccagtctgcgggtggctcaaaaggagaaggagcagctgcagatggagaaa
caggatgtgttggactatgctcgtcagctggaacagcggctgcaggcggcgtctgactac
aactggggtgagatggccttgctccacagcagcatccgcccggaaagccccatgtcggac
tcggaggatgagaagccggaagctctgcagccagttcgtagctccaggcctctggccccc
tacggcctgtgtgagcagccccagccggagcccctgctgcccgccacccctcccccctcc
cccaggaccctctccagagaggtggccgtggtgatcagccagccggcacccctctcctcc
ccacgcccaccggccagcgacacactcgcacacagctctgagtcggaggaagactgcgaa
gctccgcagtcaggaggcaacagctctggagaggagactgccctgctgctcttcgaccac
attgatcctgctctcagtgacttgacggatgccaccatgtggtga
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integrated database retrieval system
