Clupea harengus (Atlantic herring): 105912725
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Entry
105912725 CDS
T09045
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105912725 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105912725 (rarga)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105912725 (rarga)
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
105912725 (rarga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105912725
NCBI-ProteinID:
XP_031421672
Ensembl:
ENSCHAG00000026794
UniProt:
A0A6P8FEL0
LinkDB
All DBs
Position
4
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AA seq
511 aa
AA seq
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MATNRERQVGHMAGFPPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCGDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEAVLPESYELSG
ELEELVNKVSKAHRETFPSLTQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDMVFAFALQLMPLEMDDTETGLLSAICLICGDRMDLEEPEKVDRLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKVTDLRGISTKGADRAMSLKMEIPGPMPPLIREMLENPEVFED
QTEECSASKDEPPPPMPTPPSCGPPNLKQEQEDEDDSWATENGSEPSPEEEDDDDDDVGE
DDRATDSEGEAWGGLDASLEPPRKSHMGRAQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacagggaacggcaggtgggtcacatggccggcttcccacctgctgtctac
ccgtttgctttcaactccatgcggagccactcccccttcgacctgctggccaatagcagc
ctgtttggccgcttcggagctgacctgcccaaagagatggccgctctgtcggtggagacc
cagagcactagttcagaggagatggtgcccagctcgccctctccacctcctccgcctcgc
atttacaagccatgcttcgtctgcggggacaagtcctccggctaccactatggtgtcagc
tcctgcgagggctgcaagggcttcttccgccgcagtattcagaagaacatggtgtacacc
tgtcaccgtgacaagaactgccagatcaacaaggtcacacgcaaccgttgccagtactgc
cgcttgcagaagtgtttcgaggttggcatgtctaaggaagctgtgcgcaacgatcggaac
aaaaagaaaaaggacgtgaaggaggaggccgtgctgccagagagctacgagctgagcgga
gagctggaggagctggtcaacaaagtcagcaaagcccacagagagaccttcccttccctg
acccaactaggaaaatacaccaccaactctagctcagaccacagggtacagctggatctg
gggctgtgggacaaattcagcgagctctccaccaaatgcatcatcaagatcgtcgagttc
gccaaacgcctgccaggcttcaccaccctcaccattgctgaccagatcaccctcctcaaa
tcagcctgccttgacatcttgatgctacgcatctgcactcgctacaccccggagcaggac
actatgactttctcagatggactgacactcaaccgcacacagatgcacaacgccggtttc
ggtcctctcacagacatggtgttcgcttttgctctccagctgatgccgctggagatggac
gacacagagacaggcctcctgagcgccatctgcctgatttgtggagaccgcatggatctg
gaggagccggagaaagtggaccggctgcaggagcctctgctggaggctctgaagatctac
gcccggcgccggcgtcccaacaagccccacatgttccctcgcatgctcatgaaagtcacc
gacttgcgtggaatcagcaccaaaggggcggacagagccatgtcactgaagatggagatc
cccgggcccatgccacccctcatcagggagatgctggagaacccagaggtgttcgaagac
cagacggaggagtgcagcgcgagcaaggacgagccgcccccacccatgccaacgccaccc
tcatgtggcccgcctaacctgaagcaggagcaggaggacgaggacgacagctgggccacc
gagaacggcagtgagccctcgccggaggaggaggacgacgacgatgacgatgtgggggaa
gatgacagggccacggacagcgagggagaggcctggggggggctggatgccagcctagaa
ccccccaggaagagccacatgggccgagcccaatga
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