Clupea harengus (Atlantic herring): 105912766
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Entry
105912766 CDS
T09045
Symbol
lamb1b
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105912766 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105912766 (lamb1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Lipase_GDSL
Motif
Other DBs
NCBI-GeneID:
105912766
NCBI-ProteinID:
XP_031438355
Ensembl:
ENSCHAG00000023389
UniProt:
A0A6P8GU86
LinkDB
All DBs
Position
16:6877054..6904933
Genome browser
AA seq
1767 aa
AA seq
DB search
MKMLTLLIAACMALGSHAQMDTPGFGDVCAQGSCYPNTGDLLIGRGHQLTASSTCGLERP
ERYCIVSHLQEEQNCFMCDSRQPYDEHNHPASHTIETVVTTFTTNRLKTWWQSENGVENV
TIQLDLEAEFHFTHLIMTFKAFRPAAMVIERSMDYGKGWQVYRYYAYDCASTFPGISQGP
IKKVDDIICDSRYSDVEPSTQGEVIFRVLDPAFDIPDPYSTQIQNLLKITNIRVRMLKVH
TLGDNLLDIRDEVRHKYYYALYEMVVRGNCFCYGHASKCAPSDRSVEDTEGMVHGHCMCN
HYTTGLNCEKCQDFYQDHPWRPALGPNTNACKKCECNQHAYACHFDMAVYLATGNVSGGV
CDECQHNTMGRQCELCKPFYYQHPDKDIRDPNICEPCSCDPLGSLSEGLCDAVTDVISGL
IAGQCRCKQHVEGERCDKCREGHYGLSERAEGCQPCTCNPLGTVPGASPCDTYSGNCFCK
RLVTGRNCDQCLPQHWGLSNDMDGCRHCDCDQGGAINNECDPGTGQCVCREHMFGRRCDQ
IESGYYFSSIDHYTYEAEEAKFGPAVSVIQRPYPVDREPTWTGAGFAKVPEGEELTFTIN
NIPQAMEYELLIRYEPQLPAEWEQVGVRVERPRXGGGRCGGTSSDNQASSLPPGSRYVSL
PRPICFEEGQNYTVHVNLPYYSSHSDHHAPFIFIDSIVLMPHVRSLDMFSESQVDWDTYE
RYRCQERSQSVVKMQMSHICRDYIFSMSALLHQGAMKCVCDLLGSRSTVCDPSGGQCQCR
TNVMGRSCDRCVPSHFLYPSCRPCECDPQGSVHPFCQDATGQCECVPGAYGRQCAHCLPS
HWGFPHCQPCHCNGHSQFCHPLTGECQGCRGNTAGHNCERCEDGYYGNALLETGGQCRPC
MCPDGPGSRRQFAVGCYDDPYTQHVTCVCSQGHTGPRCEQCAPGYYGNPEAPDGQCHPCE
CNGNIDMMDPGSCDSRTGACVKCLHYTEGNACQYCKKGYYGNASTQDCRKCMCNERGTGS
LGCTGGECVCDEYTGQCPCLPGVVGQHCDQCALDTWNYDSGEGCQSCLCHPIHSYGSSCD
QLSGHCNCKPGFGGQTCEECRELFWGNPEVQCNACDCDPSGISSEQCNKRTGGCVCLEGY
AGHRCDACARGYSGQFPDCVRCHQCFSEWDTILSELTNHTQRLLQTVDDAKVGGVVAPYK
DLIDSLERSAGELREILEHDAVSQPLEQTQQLLQEATDLVAYLSRSLNATELTLEVVSED
HNSTESKIDDLQREADKLHQTVMDVQDQVERVKNSNFRGASDSITKYYQQSIEAESHADD
ATSGPLSIVQESANLRETTEDTMNSTKAGFDLRQELQTKQLEELATEMEALDLSALSITA
CGAGSEDGSCGGCGGLGCVAEDEAPHCGGEGCGDVNSVAQEGMNTAKNFDKEIVKALQEV
DKLNRMVSEARGRADFAKLNAEDVLLKANQSKQRVELNNQELRDLIQQIRDFLRNSTDLE
TIEALSNEVLAMDMPATAAQLEELSSDISERVTSLTGVEDILAQSHDDITQARALLQDAK
TASDLATEMKNTTDLVNERLNQTEQTQTAVQDAIAQARGDITTTQDLQATLDSETASAEF
KLNNGTRRLSGMERDLALVKAKTQETVNTATNTQRNTEYIAQQVTQTKQELDSDVLKRFS
TMESVMMQKAGSVIEGRRKAQELQEEAKQMLDHAMASLQKLRELERSYVVNQQTLEEKAH
ILKGLEKEAQEMLQDISQKVTVYSTCL
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgctgacccttcttattgcagcgtgtatggccctcgggtcgcacgcccagatg
gacacccctggattcggtgacgtttgcgcgcaaggcagctgttatcccaacaccggagac
ttgttgatcggtagaggccaccagttaaccgcgtcatccacgtgtggccttgagcggcca
gagcgctactgcatagtgagccacttacaggaggagcagaactgtttcatgtgtgactcc
agacagccctatgatgagcacaaccacccggccagccacaccatcgagacagtggtcact
accttcaccaccaatcgcctcaagacctggtggcagtcagagaacggcgttgagaatgtg
accattcagttggacttagaggccgagttccatttcacacatctcatcatgacctttaag
gcattccgtcctgctgctatggtgatcgagcgttccatggactatgggaagggctggcag
gtatatcgttactatgcctacgactgtgccagcactttcccaggtatctctcaggggcca
atcaaaaaggtcgatgacatcatctgtgattcacggtactccgatgtagagccatccacc
caaggagaggtgatcttcagagttctggatccggcctttgacatccctgatccctacagc
actcagattcaaaacctcctaaagatcactaacattcgcgtccgcatgctgaaagtccac
acacttggtgataaccttctggacatcagggacgaggtcagacacaagtattactacgcc
ctctacgaaatggttgtccgtggcaactgcttctgctacggccatgcctccaagtgtgcc
ccgtcggatcggagtgtggaagatactgagggcatggtccatggtcactgcatgtgtaat
cattacactactggtctgaattgtgagaagtgtcaggacttctaccaggaccatccgtgg
agacctgctttgggccctaacaccaatgcatgcaagaagtgtgagtgtaaccagcatgcg
tatgcgtgccactttgacatggcggtgtatctggctacggggaacgtcagcggaggagtg
tgtgacgagtgtcagcacaacaccatggggcgccagtgtgagctctgcaaacctttctac
taccagcaccccgacaaagacatcagggaccccaacatctgtgaaccgtgcagctgtgac
cctctgggttctctgagcgagggtctgtgtgacgccgtgacggacgtgatcagcgggctg
attgctggtcagtgccgctgcaagcagcatgtggagggagagaggtgtgacaagtgccgt
gagggacactacggtctgagcgagagagcagagggctgccaaccatgcacctgtaaccca
ttgggtacggttcctggagcgagcccatgtgacacatactcaggaaactgcttctgcaaa
cggctcgtcacaggccggaactgcgatcagtgtctgcctcaacactggggactcagtaat
gacatggacggttgcaggcactgtgactgtgaccagggcggggccatcaacaacgaatgt
gaccctgggacagggcagtgtgtgtgtagggagcacatgtttggccgtcgctgtgatcag
atcgagtctggttactacttcagctccattgaccactacacctatgaagcagaagaggcc
aaatttggaccggccgtaagtgtgatacagaggccctaccctgtggatcgtgagcctacc
tggacaggtgcggggttcgctaaggtaccagagggagaggaactcacgttcaccatcaac
aacatcccacaggccatggagtatgaactgctcatacgctacgaaccacagttaccggca
gagtgggagcaggtgggggtgcgggtggaacggccaagangtggaggggggcgctgtggg
ggcacctcttctgacaaccaggcatcgtcactgcctccagggtccaggtacgtgtctctg
ccaaggcccatatgctttgaggaggggcagaactacactgttcatgtgaacctgccctac
tactcatcacacagtgaccatcatgccccattcattttcatagactcgattgtgctgatg
ccgcacgtgcggtcactggacatgttctcggagtcgcaggtggactgggacacgtatgag
cgctaccgctgccaggagcgcagccagagcgtcgtcaagatgcagatgtcacacatctgc
agagactacatcttcagcatgtctgcactgctgcaccagggagctatgaagtgtgtgtgt
gatctcctgggttctcgtagcactgtgtgtgacccaagcggaggacagtgtcagtgccgg
accaacgtcatggggcggagctgcgacagatgtgtcccttcccacttcctgtatccctcc
tgcaggccgtgtgagtgtgatccccagggctcagtgcaccccttctgccaggatgccacg
ggtcagtgtgagtgtgtgccaggcgcgtacggacgccagtgtgcccactgtctgcccagc
cactgggggttcccccactgccagccgtgccactgcaacggacactcacagttctgccac
cccctcacgggggagtgccaggggtgcaggggcaacacggcagggcacaactgtgagagg
tgtgaggatggttactacggcaacgccttgctggagacagggggccagtgtcggccctgc
atgtgtcctgatgggcccggcagcagaaggcagtttgctgtgggctgctacgacgacccg
tacacacagcatgtcacgtgtgtgtgcagccaaggacacacaggtccaagatgtgagcag
tgtgcccctggttactatggcaaccctgaggcgcccgacgggcagtgccacccatgtgag
tgtaacgggaacatcgacatgatggatccggggtcctgcgactcccgcacgggcgcctgc
gtcaaatgcctgcactacaccgagggcaacgcctgccagtactgcaagaaaggttactac
ggaaacgccagcactcaggactgccgaaagtgcatgtgtaacgaacgaggcaccggcagc
ctgggctgcactggcggcgagtgtgtgtgtgacgagtatactgggcagtgcccgtgcctg
cctggcgtggttgggcagcactgcgaccagtgtgccctcgacacctggaactacgacagc
ggagagggctgccaatcatgcctgtgccaccccatacactcatacgggtcttcatgtgac
cagctctcaggccattgtaattgtaagccgggttttggaggccagacttgcgaggagtgc
agagaactgttttggggcaaccctgaggtccagtgtaatgcatgtgactgcgaccccagt
ggcatctctagtgagcagtgtaacaagcgcacaggagggtgtgtgtgtttggagggttac
gctggccatcgctgcgacgcgtgcgcccgtgggtattctggacagtttcctgactgcgta
cgctgccaccagtgcttcagcgaatgggacaccatcctgagcgagctgaccaatcataca
cagcgcctgctccagacggtagacgatgccaaagtgggcggagtcgtagcgccatacaaa
gatttgattgacagcttggagcgaagtgctggagaactgagggagattctggaacatgac
gcggtgtcacagccattggaacagacacaacagctgctgcaggaggctacggatctggtg
gcgtatttgtcccggtccctaaacgccacagagctgactcttgaggtggtctctgaggac
cacaatagcacagagtctaagattgatgacctgcagagggaggcagacaaactgcatcag
accgtcatggacgtgcaggaccaggtggagcgagtgaagaactcaaactttagaggagct
tctgacagcatcactaaatactaccagcagtccattgaagccgagtcacacgctgacgac
gccacctctggtccgctcagcatagtgcaggagtctgccaatctacgggaaaccacagag
gacacgatgaacagcacgaaggccgggtttgatctgaggcaagagctgcagaccaaacag
ctggaggagctggccactgagatggaagccctggacctatcagcactcagcatcacggca
tgtggagcaggctcagaggatggtagctgtggtggatgtggcggtctcgggtgtgtggct
gaggacgaagcgccccactgtggcggagaggggtgtggcgacgtgaactctgtcgcgcag
gagggcatgaacacagccaagaacttcgacaaggagatcgtcaaggccttgcaggaggtg
gacaagctcaacaggatggtatcagaggcccgtggtcgagctgattttgctaaactgaat
gctgaggatgttttgctgaaagccaatcagagcaaacagagggtggagcttaacaaccag
gaactacgcgatctcatacaacaaataagggacttccttcgaaacagcacagacctggag
accatcgaggccttgtccaatgaggtgctggcgatggacatgcccgcgacggctgcccag
ctggaggagttgtcctctgacatcagcgagcgcgtcacaagcctcactggcgtcgaggac
atccttgcccagagccacgatgacatcacacaggcacgcgcactgctgcaggacgccaaa
accgccagtgatcttgccactgagatgaagaacaccacagacttggtgaacgagcggctg
aatcagacggagcagactcagaccgctgtacaggacgccatcgcacaggccagaggtgac
atcacgaccacacaggacctgcaggctacactggattcagagactgcatctgctgagttt
aagttgaataacggcacccggcgtctgtcggggatggagagggatctggctctggtcaaa
gctaaaacccaggagacggtgaacacagccacaaacacacagcgcaacacggagtacatc
gcacagcaggtcacgcagaccaaacaggagcttgactctgatgtgctgaagaggttctcc
accatggagagtgtgatgatgcagaaggcggggagtgtgatcgagggccgcaggaaagca
caggagcttcaggaggaggccaaacagatgctggaccacgccatggcctcgctacagaaa
ctccgagagctggagcggtcatatgttgtcaaccagcagactctggaggagaaagcacac
attctcaaggggcttgaaaaagaggctcaggagatgcttcaggacattagtcagaaagtt
actgtctacagcacctgtctgtaa
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integrated database retrieval system
