Clupea harengus (Atlantic herring): 105912797
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Entry
105912797 CDS
T09045
Symbol
kirrel1a
Name
(RefSeq) kin of IRRE-like protein 1a isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105912797 (kirrel1a)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Kirrel/Neph family
105912797 (kirrel1a)
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
Ig_4
DDR
Syndecan
Motif
Other DBs
NCBI-GeneID:
105912797
NCBI-ProteinID:
XP_031440970
Ensembl:
ENSCHAG00000006715
UniProt:
A0A6P8H1F1
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Position
18:16220743..16261219
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AA seq
831 aa
AA seq
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MQRILLLSLALCTFHRVAGAARFSQEPADQSVVLGQRVVLSCVVFNYSGIVQWTKDGLAL
GIGEDLRAWPRYRVLRLVDVGQYNLEITYAELSDDSLYECQATEAALRSRRAKLTVLIPP
DDPVIEGGPEILLTAGAPFNLTCVSRGAKPASIIEWLKEGLPVEGAVSTTELLRDRKRVT
TRSFLPILPVDTDTGRNFTCITSNQAIPAGKRTTAKLNVYHPPIVTLSIEPRSVLEGERV
TFTCQATANPPIRGYKWAKGGVILQGARERVFVTKADHSFFTEPVSCLVFNDIGSTNVSI
LVDVHFGPYLVVEPRPVTTDIDSDVTLNCKWSGNPPLTLTWTKKGSSMVLSNSNQLYLKS
VSQADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSEAVQYAVRGERGEVKCYIASTPP
PDKIVWAWKENVWEKENGKLMERYTVEQSKPSQGGAVLSTLTINNVMETDFQSTYNCTAW
NAFGPGTMIITLEEMEIVPVGIIAGGTIGCIILVLLLSMALVLFLYRQRKGSRRGVTLGK
PDIKVETINKETHSLEEDSASVSTATRMVKAMYSFLPSVSLSPSSQPFKDDIDHKQELRS
DTLDTRQDYELKDPTNGYYNVRASTHDEGRPASRSMHYSEYRTTTTAGGAATVSVSASSA
GGGAGGAAGGGGGGTPGSLAPGSRGGGCYDPRPPSRLSHNSYAQFNTFGRAGQSQQGGAS
AGPSPGDFPPDCSLLDSSPQLAYDNYAYPSHYPSYRMGFAPPSLAPLEGGPAYEMYGVGP
PVGGGAGGGAGAPGAGSEASLGKYGSSTRFSYTSQHSDYSHRHTQRMQTHV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggattctgctcctgagtttggcgctgtgtacttttcaccgagtggccggagcg
gcccgtttctcccaggagccggcggaccagtcggtggtgttgggccagagggtggttctg
tcctgcgtggtcttcaactactcgggcatcgtgcagtggaccaaagacggcctggccctg
ggcatcggagaggacctcagggcctggccacggtaccgtgtgttgcgtcttgtggacgtg
gggcagtataacctggagatcacctatgctgagctgtctgatgattcgctctatgagtgt
caggccactgaagccgccctgcgctcacgaagagccaagctcactgtgctcatccctccg
gatgacccagtgatagaaggtggccccgagattttactgacagcaggggctcccttcaac
ctgacgtgtgtgtcacgaggagccaaaccagcctccatcatcgagtggcttaaagaggga
ctgcctgtagagggggcagtcagcaccacggagttactgcgggaccgcaagagagtgacc
actcgcagtttcctgcctatcttgccggtggacacagacacagggcgcaacttcacctgc
atcacctccaaccaggccataccagcagggaagcgcaccaccgccaaactcaacgtgtac
catcctcccatagttactctgtccatagagccgcgctctgtactggaaggagagagagtc
acctttacctgccaggctacagccaaccctcctatcaggggatacaagtgggcgaaaggt
ggtgttatcctccagggggccagggagagggtgtttgtgactaaagctgaccactccttc
ttcactgaacctgtctcctgcctcgtcttcaacgacatcggcagcaccaacgtcagcatc
ctggtggacgtacactttgggccctatctagtggtagagcctcgtcccgtgacgacggac
attgactcggacgtgacgctcaactgcaagtggtctggaaatcctcccctcaccctcact
tggaccaagaagggctccagcatggtgctcagtaacagtaaccagttgtacctgaagtcg
gtgagccaggcagatgctggtcagtacgtgtgtaaggccatcgtgccccggatcggcgtg
ggagagacagaggtcacacttacagtcaacggtccacccatcatctccagcgaggctgtt
cagtatgcagtgaggggtgagaggggagaggtcaaatgctacattgccagcacccctcct
cctgataagattgtgtgggcatggaaggagaacgtgtgggagaaagagaatgggaagctc
atggagcgctacactgtggagcagagtaaaccgtcacaaggtggcgctgttctctccacc
ctcaccatcaacaatgtcatggagaccgatttccaatccacctacaactgcaccgcctgg
aacgcttttggccccgggaccatgatcatcacactcgaggagatggaaatagtgcctgtt
gggatcatagctggcgggacgattggctgtatcatcctggtgctgctgctctctatggct
ctagtgctcttcctctaccgccagcgcaaaggcagtcgtcgtggggtcacccttggcaag
cctgacatcaaggttgagaccatcaacaaagagacgcatagcctggaagaggactccgcc
agtgtctctacggcgacgcgcatggtcaaggccatgtactcttttttgccctctgtgtcc
ctgtctccctcatcccagccctttaaggacgacatcgaccacaaacaggagctacgcagc
gacacactcgacacacggcaggattacgagctcaaggaccccacgaatggctactataac
gtgcgcgcctccacccatgacgagggtcgcccggcgtctcgctccatgcactactccgag
taccgcaccaccacgacagcagggggcgccgccacggtcagcgtgagcgccagctctgcc
gggggcggggccgggggagcggccggggggggaggcgggggcacgccggggagtctggcg
ccgggttctcgaggggggggctgctatgacccccggcccccgtcgcgcctctcccacaac
agctacgcccagttcaacaccttcggcagggcggggcagagccagcagggcggggctagc
gcgggtccctcccccggtgacttcccgcccgactgcagcctgttagactcctccccccag
ctggcttacgacaactacgcctacccctcgcactacccctcgtacaggatgggctttgcc
ccgcccagcctggctccactggagggcggcccagcctatgagatgtatggggtggggcca
cctgtagggggtggggcagggggaggggctggagctccgggggcgggctcagaggcaagc
ctggggaagtacggcagctccacgcgtttctcctacacctcacagcattccgactactca
cacagacacacacagaggatgcagacacacgtttga
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