Clupea harengus (Atlantic herring): 105912883
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Entry
105912883 CDS
T09045
Symbol
dtx4a
Name
(RefSeq) E3 ubiquitin-protein ligase DTX4a isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
105912883 (dtx4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105912883 (dtx4a)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105912883 (dtx4a)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105912883 (dtx4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
Motif
Other DBs
NCBI-GeneID:
105912883
NCBI-ProteinID:
XP_031440755
Ensembl:
ENSCHAG00000012449
UniProt:
A0A6P8H0Y1
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All DBs
Position
18:complement(16857166..16875986)
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AA seq
831 aa
AA seq
DB search
MEHRLLVKHGTHCRLHLSCKRRCCCCCCCKCMMLLASAVVVWEWLNEHGRWRPYSPAVSH
HIEAVIRSDPRGSSVVLGQVDSRLSPYIIDLHSMHQFRQDTGTLRPVRRSFYDPTSAPGH
GWLWEWENDSGSWTAYDTEVSIAIQAARDRNQPWLDLSPLGFCYLIDLQTMTQFNRQTQR
RRRIQRRSDLAYPLVTGPLPRAWGSGMGAGGGGGGGGVGGEGGGGAGRFGGAGGGLLGVG
VSGVVSRGNGSAYPSGALPASAITSLGQPCSCQQCMLVLGVKTGFGGGGGAHTLGRKPPP
PLPPPIQTKPPSPKSGPPQRGYSYSLTLPHPMSLSRVLAPHRNSMLVSSGGGMGMGMGLG
MGGVGTNSSNGGFAHSLSLLGAATAGLSLSSTPASSSALPSSSSFSRPPPPPMPPPMPPP
PPPSVSTTTSSGMPTIPPVSAPTTATGASGASVSTVTAAASGGGGQALISTVTSCAPTPS
ARVLGPVSSACAAPLPPRSSLAGLSRPALQRIAMAQSRALIASGVPTVPVKNLNGSSPVH
PALAGITGILMSAAGLPVCLTRPPKLVLHPPPVSKSDIKPVPGLGHCCRKTTKKQARKGR
TSEEVVKRYLQKVRNPPEEDCTICMEALSGPSGYKGPGVGGISRVESVGRLALCGHQYHL
QCLVAMYNNGNKDGSLQCPTCKTIYGVKTGNQPPGKMEYHVIPHSLPGHPDCKTIRIIYN
IPPGIQGPEHPNPGKPYTARGFPRHCYLPDTEKGRMVLRLLLVAWDRRLIFSVGTSSTTG
ESDTVIWNEVHHKTEFGSNLTGHGFPDPGHLDNVLEELRAQGITEDESLRD
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagcataggcttcttgttaaacatggaacccactgtaggcttcatctttcttgcaag
cgtcgctgttgctgctgctgctgctgcaagtgtatgatgttgctagcatcggccgtggtc
gtatgggaatggctaaacgaacacgggcgctggcgtccctacagcccggccgtgtctcat
cacatcgaagcggtgatccgcagcgacccacggggaagcagtgtggtactaggccaggtt
gactcgaggctgtcgccgtacatcatcgacttgcactccatgcatcagtttcggcaagac
acaggcacccttcggccggtgcggcgcagcttttacgacccgacttcggcgccgggtcac
ggctggctgtgggaatgggagaacgactcgggctcgtggacggcctacgacacggaggtg
agcatcgccatccaggcggcgcgtgaccgcaaccagccctggctggacctgtcgccgctg
ggcttctgctacctcatcgacctgcagaccatgactcagttcaaccggcagacccagcgc
cgccggcgcatccagagacgctcggacctggcctacccgctcgtgacggggccgctgccc
agggcatggggtagtggcatgggggccgggggtggtggtggtggtggtggggtaggaggg
gaaggaggcgggggtgctgggaggtttgggggtgctggtgggggtttgctgggcgtgggg
gtgtcgggggtggtgagcaggggcaatggcagtgcctacccgagcggcgctctcccggcc
tcggccatcacctcgcttggacagccctgctcgtgccagcagtgcatgctggtcctgggc
gtgaagacggggttcggcggtggtggtggtgcgcacacgctgggtcgcaagcccccgccg
cccctgccccctcctattcaaactaagccgcccagccccaaatcgggacccccgcagagg
ggctactcgtactcgctgaccctcccccaccccatgtccctgtcccgggtcctggcccct
cataggaactccatgctggtgtctagtgggggtggcatggggatggggatggggttgggc
atgggtggtgttggcacgaacagcagtaatggcggcttcgcccactccctgtctctgctg
ggggcggccactgctggactctctctctcctccacacccgcctcttcttcagccctgccc
tcctcttcctcgttttcgcgccccccgccgcccccaatgccaccccccatgccacccccg
cctccgccgtcggtttcgaccaccacttcctccgggatgccgaccattcctcccgtttcc
gcgccgacgaccgccaccggggcctctggggccagcgtcagcacggtgaccgcagccgct
agtggcggtggcgggcaggcgctcatttccacagtgaccagctgcgcccccacgccgtcg
gcacgtgtactgggccctgtgtcatcagcatgtgccgcgccgcttcccccacgctccagc
ctggcaggactgagtcgtccggcgctgcaacgcattgccatggcacagtcacgggcgttg
atcgcatcaggggttcccaccgttccagtgaagaacctaaatggctccagccctgtgcat
cctgctctggcaggcatcacaggcattctgatgagtgctgccggtctgccggtctgtctt
acccggccgccaaagctggtacttcacccgccgcccgtcagcaagagcgacatcaagccc
gtgccaggcctgggacactgctgtcgcaagaccaccaaaaagcaggcgcgcaaaggaaga
acatcagaggaagtggtgaagagatacctgcagaaggtccgtaaccccccggaggaggac
tgcaccatctgtatggaggccctctccggcccttcaggctataagggcccgggcgtgggt
ggcatctcgcgggtggagtcagtgggccgcctggccctgtgcgggcatcagtaccacctg
cagtgcctggtggccatgtacaacaacggcaacaaggacggcagcctccagtgccccacc
tgcaagaccatctatggcgtgaagacgggcaaccagccccccggcaagatggagtaccac
gtcatcccccactctctgcctgggcaccccgactgcaagaccatccgcatcatctacaac
attccaccaggcatccagggtcctgagcatcccaaccccggcaagccctacactgcccgc
ggattcccccgccactgctacctcccagacacggagaaaggacgaatggtcctgcgtttg
ctgctggtggcctgggaccgtcgtctcatcttctctgtgggcacgtccagcaccaccggc
gagtcggacaccgtcatctggaacgaggtccaccacaagaccgagttcggctccaacctg
acgggccacgggttccccgacccgggccacctggacaacgtgctggaggagctccgtgcc
cagggcatcaccgaggatgagagcctgagagactga
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