KEGG T09045: 105912950

Clupea harengus (Atlantic herring): 105912950

Entry

105912950         CDS       T09045

Symbol

ncbp2

Name

(RefSeq) nuclear cap-binding protein subunit 2

K12883

nuclear cap-binding protein subunit 2

Organism

char Clupea harengus (Atlantic herring)

Pathway

char03013

Nucleocytoplasmic transport

char03015

mRNA surveillance pathway

char03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:char00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105912950 (ncbp2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    105912950 (ncbp2)
   03015 mRNA surveillance pathway
    105912950 (ncbp2)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105912950 (ncbp2)
   03041 Spliceosome [BR:char03041]
    105912950 (ncbp2)
Messenger RNA biogenesis [BR:char03019]
Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     105912950 (ncbp2)
Spliceosome [BR:char03041]
Common components
  Common spliceosomal components
   Cap binding complex
    105912950 (ncbp2)

SSDB

Motif

Pfam:

RRM_1

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

10:17936738..17938887

AA seq 154 aa
MSVKLNALYSDSYVDVSQYRDQHFKGNRTEQEKLLRGSNTLYVGNLSFYTTEEQVHELFA
KSGDVKRIIIGLDKVKKTACGFCFVEYYTRVDAENAMRFINGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKVIHK

NT seq 465 nt +upstreamnt +downstreamnt
atgtcggtgaagttgaacgctctgtatagcgactcctatgttgacgtaagccaatataga
gaccaacatttcaagggtaacagaacggaacaagagaagctactccgcgggagtaacacg
ctgtacgtagggaacctgtctttttatactacagaggaacaggttcacgaactctttgcc
aaaagtggcgacgtcaagagaatcattattggacttgacaaggtgaagaaaaccgcctgc
ggcttttgttttgtggagtactacactcgtgtagacgcggaaaacgctatgaggttcatc
aacggcacgcgtctggacgaccgcatcatccgcactgactgggatgcggggttcaaggag
ggccgtcagtatggccgagggaagtctggtggtcaggtcagagatgaatacagacaagac
tatgacccagcccgggggggctatggaaaagtgattcataagtga

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