Clupea harengus (Atlantic herring): 105912977
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Entry
105912977 CDS
T09045
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105912977 (khdc4)
Spliceosome [BR:
char03041
]
Complex B
Other components
Prp19-related factors
105912977 (khdc4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
Dehydrin
Motif
Other DBs
NCBI-GeneID:
105912977
NCBI-ProteinID:
XP_031432897
UniProt:
A0A6P8GBJ4
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Position
11:complement(11363963..11373532)
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AA seq
609 aa
AA seq
DB search
MSFGGTSNGGRRSKWDQPGPGSMGEAEAAPTGALDAAAAVAAKINAMLVAKGKLKPSQIG
GPGPVDKGSAGKPQQPVKAKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISKVSGAAVST
RGRYMTVEEKNKALPSERPLYLHVQGQTRDIVDRAVNKIKEIITNGVVKAATSSNAAAVT
VYQQPPPPAMPPMGHKPHYQSGMHQHYVQDKLFVGLEHAIHGFNVKEKVEGPCCSFLQHI
QSETGAKVFLRGKGSGCLEPASGREAFEPMYIYISHPKPEGLAAAKTLCENLLQTVHAEY
SRFLSQMTAMVPTQGFLQPPPVNGLPPQPPYGPPTGYQPPVYPMPMPPPQPIPPPYVVPP
QMPPGQPPAPIPPPSAHYPINPAPPVMPQTLSQAPFHPVAPVLPKVPPPTSMHNPPQKRR
FTEEVPDERDSGLLGYQVIARSNSLSHYLSLFLCKQASLADEHGPIHMTNLGAGFSMGNP
ESSGPPPSSSSGPPKERDCRQLMPPPPMPVNGGVRPPKLEERRSLAGTQEQSVKRLKTGL
VAYTGDSSDEEEDHSTPKSAGAGNSAMISSSSSSSSSSGWTLGVYRTPPPQPPRPKTQAP
QSMPFWMAP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttggtggaacatcaaatggcggtcgccgcagtaagtgggaccagccggggcca
ggctctatgggggaagccgaggcggcgccaacgggggctctggatgcggccgccgccgta
gccgccaagataaacgccatgcttgtggctaagggcaaactcaagccctctcagatcggt
ggacctgggcccgtggataagggttcagctggtaagcctcagcagccagtgaaagccaag
gacgacctggtggtggctgaggtggagattaatgatgtgcctctcacctgccgcaatctt
ctgaccagaggacagacacaagacgagatcagtaaagttagtggtgctgccgtgtccacg
agggggcgctacatgacagtagaagagaagaacaaggcattgccaagtgaacgtccactt
taccttcatgtccagggccaaaccagggatatagtggatcgagctgtgaataagataaag
gagatcatcaccaacggtgtggtgaaggccgccaccagctcaaatgctgcggcggtcacc
gtctaccagcagccccctcccccagcaatgccccccatgggccacaaaccacactaccag
tcagggatgcaccagcactatgtccaggacaagctgtttgtgggcctggagcacgccatc
cacggtttcaacgtgaaggagaaggtggagggcccatgctgctccttcctccagcacatc
cagtcggagacgggcgccaaggtcttcctcaggggcaagggctctggctgcctggagcct
gcctctgggagagaggcctttgaaccgatgtacatctacataagtcaccctaaacctgag
ggccttgcagcagccaagactctgtgtgaaaacctcctacagacagtgcatgcagagtac
tctcgcttcctcagtcagatgactgccatggtgcccactcaaggcttcctccagcccccc
ccagtgaacggcctcccgccccagcccccctacggcccccccacggggtaccagccgcct
gtctaccccatgcccatgccccctcctcagcccatccctccaccctacgttgtgccccct
cagatgccccctgggcagccccctgccccaatcccaccccccagtgcccattatcccatc
aaccccgcgccgcccgtcatgccccagacgctgtcccaggctcctttccaccctgtggct
ccagttcttcctaaagtccctccccccacgtccatgcacaaccccccccagaagcggcgc
ttcactgaggaggtccctgacgagcgcgacagcggcctgctgggataccaggtgatcgcc
cgctccaacagcctctcacactatctgtcactctttctctgcaaacaggcctcgctggct
gatgagcatggacccattcatatgactaatttaggtgcaggcttctctatgggcaacccc
gagtcttcaggacccccgccttctagttcctctgggcctcctaaggaaagggactgtcgg
cagctaatgccaccgccacccatgccagtgaacggaggagtgcggccgcccaaactggag
gagagaaggtcactagccggcacccaggaacaatctgtgaagcgtctgaagacgggactg
gtggcgtacaccggagactcgtctgatgaagaggaggaccactcaacccctaaatcggcc
ggggcaggtaactcggccatgatctcctcatcctcttcctcctcctcctcctcagggtgg
actctgggggtgtaccgaaccccccctccccaaccaccacgacccaaaacacaggcgccg
cagtccatgccattttggatggccccttaa
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