Clupea harengus (Atlantic herring): 105912999
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Entry
105912999 CDS
T09045
Symbol
tars2
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105912999 (tars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105912999 (tars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105912999 (tars2)
Enzymes [BR:
char01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
105912999 (tars2)
Amino acid related enzymes [BR:
char01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
105912999 (tars2)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105912999 (tars2)
Prokaryotic type
105912999 (tars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
105912999
NCBI-ProteinID:
XP_031432871
Ensembl:
ENSCHAG00000007077
UniProt:
A0A6P8G8Y9
LinkDB
All DBs
Position
11:complement(11693075..11715349)
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AA seq
711 aa
AA seq
DB search
MLYASAPCSTFPCGTFSHFVSLRSSLLLVQSLGSMLRPPLGRVPVSWRRTPSACGSERLR
TFERLLQKRTATVPLSERRLTVQLADGRTVKATAGVTTPLLLAKNARVKGAVVAKVNGQL
WALQHPLEDDCELHLLGFDTMEGRQVVWRTGACVLGRVMEAHFAAQVCREGVSDTGLYCD
YQLDNSSLSLGEVEAACKEVSSLKLPLTTLELSVDELKELFQDCSLRLRLAEEQMIGPSL
AVYRCGETVGVCNGPVLPHTGFLRAFKMLQVSPVTLGEAEDSCGLVRVMGVSFPGQREMD
EWEKEQEEARKRDHRRIGKDQELFFFNDVSPGSCFFLPKGAHIYNTLTDFIKSEYRRRGF
SEVVTPTLFSKSLWERSGHWEHYSENMFTVTCEPHTYALKPMNCPAHCLMFEQRVRSWRE
LPLRWADFGALHRNELSGALGGLTRVRRFCQDDAHIFCTPEQLESEITSCLEFVRSVYRV
FGFSFHCLLSTRPTPCLGEPALWDNAEMQLECSLQGFGERWELNPGDGAFYGPKIDILIC
DAIGRQHQCATIQLDFQLPIRFNLQYVGVDGSMHRPVMVHRAVLGSLERMIAILAENFGG
KWPFWLSPAQIMVVPVGGDSEQYAQKVVHKLKDSGFMADVDDDHGTTLNKKIRSAQLAQY
NYIFVVGEKERGSGTVNIRTRAGKQLGQRSLEEVMTSLKELQESRSNHDDF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatgcatcagcgccatgctcaactttcccgtgcggcacgttctcccattttgtg
tcattacgcagctcccttctattggttcaatctctgggttcaatgctgcgccctcccctt
ggtagagttccggtatcatggcgtcggacaccttctgcgtgtgggtcagagcgcctgcgg
acctttgaacgcctcctgcagaaacggactgcaactgtgccgttgtcggagcggcgtcta
actgtgcagttagctgatggcagaacagtgaaggccacggcaggggtcacgaccccattg
ctcctggcgaaaaatgctcgtgtaaaaggtgcagtagtggccaaggtcaatggccagctc
tgggcgctacagcaccctctggaggatgactgtgaactgcacctgctgggctttgacaca
atggaggggaggcaggtggtgtggcggacgggggcatgtgttttggggagggtgatggaa
gctcactttgctgcccaggtgtgccgggaaggtgtgtcagacacaggcctctactgtgac
taccagctggacaacagctccctgtctctaggtgaggtggaggcggcctgtaaggaggtg
tcgtctctgaagctgcccctcaccactctggagctgagtgtggatgagctcaaggagctc
tttcaggactgctctctcaggctacgcctggctgaggaacagatgattgggccgtcgcta
gctgtctacaggtgtggtgagactgttggagtgtgtaatggccctgttcttccccacaca
ggcttcctcagagcctttaagatgctgcaggtgtctccagtgactctaggggaggcagag
gactcctgcggactggtgcgggtgatgggcgtgtcgtttccagggcaacgggagatggac
gagtgggagaaggagcaggaggaggctcgcaagagagaccatcgccgcatcggcaaggat
caggaactcttcttcttcaatgatgtcagtcctggcagctgtttcttcctgcccaaagga
gcacacatctataacacactcaccgacttcatcaagagtgagtatcggagacggggcttc
agtgaggtggtgacccccaccctcttcagcaagtcgctatgggaacgctcgggccactgg
gagcactacagtgagaacatgttcaccgtgacctgtgagccgcacacctacgccctcaag
cccatgaactgccccgcccactgcctgatgttcgagcagcgggttcgctcgtggcgggag
ctgcctctgcgctgggcggacttcggcgcactgcaccgcaacgaactctcgggggcgcta
gggggccttacccgcgtcaggcgcttctgccaggacgacgcccacatcttctgcaccccc
gaacagttggagagcgagatcacttcgtgcctggagtttgtgaggagtgtgtatcgcgtg
tttggtttctccttccactgtctgctctccacacgacccacaccctgcctgggcgagcct
gccctctgggacaacgcagagatgcagttggagtgcagcctgcaggggtttggggagcgc
tgggagctgaacccaggagacggtgccttctacggccctaagattgacattctgatttgt
gatgcaatcggcagacagcaccagtgtgccaccattcagttggatttccagctgccaatc
agattcaaccttcagtatgtgggtgtggatgggtcgatgcataggccagtaatggtccac
cgagctgtgttagggtctctggagaggatgatcgccatattggccgagaacttcggaggg
aaatggcccttctggctgtctccagcgcagatcatggtggttcctgttgggggcgatagt
gagcaatacgctcagaaggtggttcataagctcaaggactctggcttcatggctgacgtg
gatgacgatcacgggaccactttaaataagaagatccgcagtgctcagctggcccagtat
aactacatctttgtggtcggagagaaggagagaggcagcggcacagtgaacattcggacg
agagctggcaagcagctgggtcagaggtcactggaggaggtgatgacgtcactgaaggag
ctgcaggagagccgtagcaaccacgacgatttctga
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