KEGG   Clupea harengus (Atlantic herring): 105913167
Entry
105913167         CDS       T09045                                 
Symbol
stambpa
Name
(RefSeq) STAM-binding protein-like A
  KO
K11866  STAM-binding protein [EC:3.4.19.12]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:char00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    105913167 (stambpa)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:char01002]
    105913167 (stambpa)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:char04131]
    105913167 (stambpa)
   04121 Ubiquitin system [BR:char04121]
    105913167 (stambpa)
Enzymes [BR:char01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     105913167 (stambpa)
Peptidases and inhibitors [BR:char01002]
 Metallo peptidases
  Family M67
   105913167 (stambpa)
Membrane trafficking [BR:char04131]
 Endosome - Lysosome transport
  Others
   Others
    105913167 (stambpa)
Ubiquitin system [BR:char04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   JAMM
    105913167 (stambpa)
SSDB
Motif
Pfam: JAB USP8_dimer Prok-JAB
Other DBs
NCBI-GeneID: 105913167
NCBI-ProteinID: XP_012697657
Ensembl: ENSCHAG00000027000
UniProt: A0A6P3WFM3
LinkDB
Position
12:4293400..4299283
AA seq 430 aa
MSDHNDTSLQPLERVRVLTKMGSSVDVNEDVPPRRYFRSGMEIIRMASVYADEGNTEHAF
ILYNKYITLFIEKLPKHRDYKTAKIPEKKETMRKLKEIAFPKAEELKKLLLTQYDKDYAE
YLVRKKAEEEAHARELARQRQLEAERQQQAQHQQRQREQEQVLVFEEMLRRQELERERQR
ILQEFGPPVGPPVAPTAPLPFLVDDDQGPPQALNVNPTPPQSPESTPNHTFPPATAPTFD
RSLKPAVPVNSGNSLTIDGIRQLAVSSELCQKFLKLADSNTARAVETCGILCGKLTKNAF
TVTHVIVPKQSGGPDYCDTENEEELFLIQDQYDLITLGWIHTHPTQTAFLSSVDLHTHCS
YQMMLPESIAIVCSPKFKETGYFRLTDHGMTEISTCKQKGFHPHTKEPPLFTESRHVTIT
DIGVTVLDLR
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgtctgaccacaacgacaccagtctccaacctttggagcgtgtccgtgtcctcactaaa
atgggaagttcggtcgacgtgaacgaggatgtgccgccccggcgatactttcgatctggt
atggagattatccgtatggcaagtgtttatgcagatgaagggaacacggagcatgcgttc
atcctctacaataaatatataacgcttttcattgaaaaacttcccaaacatcgagactac
aaaacagccaaaatacctgaaaaaaaggaaaccatgaggaagctgaaagagatcgcattt
ccaaaagctgaagaactgaagaagctactcttaacacaatatgataaagattatgcagaa
tatcttgtgcgaaaaaaagcagaggaggaggcccacgcacgcgagctggccaggcagagg
cagctggaggcggagcggcagcagcaggcccagcaccagcagcgccagcgtgagcaggag
caggtgctggtctttgaggagatgctgcgccggcaagagctggagcgcgagcggcagcgc
atcctgcaggagtttggcccgcccgtcggcccacccgtcgcccccaccgcacctttgcct
ttcctggtggatgatgaccagggaccaccccaagcccttaatgtcaacccaacacccccc
cagagtcctgagagcaccccgaaccacaccttcccacccgccaccgccccaacgtttgac
cgttctctgaaacccgcagtcccagtcaactctgggaatagtctgaccatagatggcata
cggcaacttgcagtaagctctgaattgtgccaaaagttccttaagttagcagatagcaac
acagcccgcgcagttgagacctgtggcattctttgtggcaaattgaccaagaatgccttc
acagtgacccatgtgatcgtccccaagcagtctgggggacctgactactgtgacacagaa
aacgaggaagagcttttccttatccaggaccagtacgacctcatcacccttggctggatc
catacccatcccacacaaacagcattcctgtccagtgtggaccttcacacccattgctcc
tatcagatgatgttaccggagtccattgccattgtctgctctcctaaatttaaagagact
ggctatttcagactgacagatcatggaatgaccgaaatctctacctgcaaacaaaaagga
ttccatccacacaccaaggagcctccattgtttacagaaagcagacatgtcaccatcact
gatattggtgtgacggtgctggacttgcggtga

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