Clupea harengus (Atlantic herring): 105913167
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Entry
105913167 CDS
T09045
Symbol
stambpa
Name
(RefSeq) STAM-binding protein-like A
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105913167 (stambpa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105913167 (stambpa)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105913167 (stambpa)
04121 Ubiquitin system [BR:
char04121
]
105913167 (stambpa)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105913167 (stambpa)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M67
105913167 (stambpa)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Others
Others
105913167 (stambpa)
Ubiquitin system [BR:
char04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
105913167 (stambpa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
105913167
NCBI-ProteinID:
XP_012697657
Ensembl:
ENSCHAG00000027000
UniProt:
A0A6P3WFM3
LinkDB
All DBs
Position
12:4293400..4299283
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AA seq
430 aa
AA seq
DB search
MSDHNDTSLQPLERVRVLTKMGSSVDVNEDVPPRRYFRSGMEIIRMASVYADEGNTEHAF
ILYNKYITLFIEKLPKHRDYKTAKIPEKKETMRKLKEIAFPKAEELKKLLLTQYDKDYAE
YLVRKKAEEEAHARELARQRQLEAERQQQAQHQQRQREQEQVLVFEEMLRRQELERERQR
ILQEFGPPVGPPVAPTAPLPFLVDDDQGPPQALNVNPTPPQSPESTPNHTFPPATAPTFD
RSLKPAVPVNSGNSLTIDGIRQLAVSSELCQKFLKLADSNTARAVETCGILCGKLTKNAF
TVTHVIVPKQSGGPDYCDTENEEELFLIQDQYDLITLGWIHTHPTQTAFLSSVDLHTHCS
YQMMLPESIAIVCSPKFKETGYFRLTDHGMTEISTCKQKGFHPHTKEPPLFTESRHVTIT
DIGVTVLDLR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccacaacgacaccagtctccaacctttggagcgtgtccgtgtcctcactaaa
atgggaagttcggtcgacgtgaacgaggatgtgccgccccggcgatactttcgatctggt
atggagattatccgtatggcaagtgtttatgcagatgaagggaacacggagcatgcgttc
atcctctacaataaatatataacgcttttcattgaaaaacttcccaaacatcgagactac
aaaacagccaaaatacctgaaaaaaaggaaaccatgaggaagctgaaagagatcgcattt
ccaaaagctgaagaactgaagaagctactcttaacacaatatgataaagattatgcagaa
tatcttgtgcgaaaaaaagcagaggaggaggcccacgcacgcgagctggccaggcagagg
cagctggaggcggagcggcagcagcaggcccagcaccagcagcgccagcgtgagcaggag
caggtgctggtctttgaggagatgctgcgccggcaagagctggagcgcgagcggcagcgc
atcctgcaggagtttggcccgcccgtcggcccacccgtcgcccccaccgcacctttgcct
ttcctggtggatgatgaccagggaccaccccaagcccttaatgtcaacccaacacccccc
cagagtcctgagagcaccccgaaccacaccttcccacccgccaccgccccaacgtttgac
cgttctctgaaacccgcagtcccagtcaactctgggaatagtctgaccatagatggcata
cggcaacttgcagtaagctctgaattgtgccaaaagttccttaagttagcagatagcaac
acagcccgcgcagttgagacctgtggcattctttgtggcaaattgaccaagaatgccttc
acagtgacccatgtgatcgtccccaagcagtctgggggacctgactactgtgacacagaa
aacgaggaagagcttttccttatccaggaccagtacgacctcatcacccttggctggatc
catacccatcccacacaaacagcattcctgtccagtgtggaccttcacacccattgctcc
tatcagatgatgttaccggagtccattgccattgtctgctctcctaaatttaaagagact
ggctatttcagactgacagatcatggaatgaccgaaatctctacctgcaaacaaaaagga
ttccatccacacaccaaggagcctccattgtttacagaaagcagacatgtcaccatcact
gatattggtgtgacggtgctggacttgcggtga
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