Clupea harengus (Atlantic herring): 105913188 Help Entry 105913188         CDS       T09045                                  Symbol atg4c Name (RefSeq) cysteine protease ATG4C   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism char  Clupea harengus (Atlantic herring) Pathway char04136   Autophagy - other char04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:char00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     105913188 (atg4c)    04136 Autophagy - other     105913188 (atg4c)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:char01002]     105913188 (atg4c)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:char04131]     105913188 (atg4c)    03029 Mitochondrial biogenesis [BR:char03029]     105913188 (atg4c) Peptidases and inhibitors [BR:char01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    105913188 (atg4c) Membrane trafficking [BR:char04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     105913188 (atg4c) Mitochondrial biogenesis [BR:char03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     105913188 (atg4c) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 Motif Other DBs NCBI-GeneID:  105913188 NCBI-ProteinID:  XP_012697670 Ensembl:  ENSCHAG00000025344 UniProt:  A0A6P3WG29 LinkDB All DBs Position 10:2415625..2426413 Genome browser AA seq 461 aa AA seqDB search MEKGNDEVDKLKSRFVSAWHNVKYSWVLKSKTSFSRNSPVFVLGKCYHFKVEDEETPTDN SSFESADDEIVMGNVEAFRKDFASRVWLTYREDFPALLDSALTSDCGWGCTLRAGQMMLA QGLINHFLGRDWTWSETLSLQPLDSETWTSTAARKLVASLEATLQGDRPVARLPVPQPQG GGAEEADTHLREVYHRTVVSWFGDGPSAQLGMHRLVELGRTSGKRAGDWYGPAVVAHIIR RAVEEATESDLTGISVYVAQDCTVYSADVIDSHAPRPGGPPKLPGEALMDTRAVIILIPI RLGGEKINPDYFNFVKGILSLDYCIGIIGGKPKQAYYFVGFQDDSLIYMDPHYCQSFVDV STSDFPLQSYHCPSPKKMPFNKMDPSCTIGFYSRTVEDYNRISTELAKILKPSAKEKYPA FTFVNGHGRDYELAGPMEKREWPFIRDSRRLGATAGDFVLL NT seq 1386 nt NT seq  +upstreamnt  +downstreamnt atggagaaagggaacgacgaggtggataaattgaagtcgaggtttgtgtccgcttggcac aatgtaaaatacagctgggtgctgaagtccaaaacctcatttagcagaaattctcctgtt tttgtccttggaaagtgctatcattttaaagttgaagatgaggaaacccccacagacaac agtagttttgagtcagccgatgacgagattgtcatgggaaatgtggaagctttccgaaaa gactttgcctctcgggtgtggctgacatatagggaagactttcctgctctcctcgactct gcccttacttccgactgtggctggggttgcaccttgagggcaggacagatgatgctcgct cagggcctgatcaatcacttcctgggaagagactggacatggtcagagactctgtctctc cagcctctggactcagaaacgtggaccagcactgcggcgcgtaagctggtcgcctctctg gaggcgacgctgcagggagacagacccgtggcccggctgcctgttccccaaccccaggga gggggggcggaggaggcagacacacatctgagagaggtgtaccaccgaactgtggtgtcc tggttcggggacggcccctcggcccagctgggcatgcacaggctggtggagctgggcagg acctcagggaaacgggctggtgactggtacggcccagcggtggtggcacacatcatcagg agagctgtggaggaggcgacggaatcagacctgaccggcatcagtgtttatgtggcccag gactgcacagtctacagtgcggatgtcatcgacagccatgcgccccggccaggggggccc ccaaagctgcctggggaggcactgatggacaccagggccgtcatcatcctcatccccata cgcctcggcggagagaagatcaaccctgactacttcaatttcgtcaagggcatcctgagt ctggactactgcatcggcatcataggagggaagcctaagcaggcgtactactttgtggga tttcaagatgacagcttgatttacatggaccctcattactgtcagtcttttgtggacgtc agcacgagcgatttccctctccagtcatatcattgcccgtctccaaagaagatgcctttc aacaaaatggatcccagctgcaccataggcttctactctagaactgttgaggactacaac cgaatcagcaccgaactggctaagatcctgaagccttcagccaaggagaagtacccagca ttcacctttgtgaacgggcacggacgagactacgagctggcgggccccatggagaaaaga gaatggcccttcatcagggacagccgaagacttggggccacggccggggactttgtgttg ctgtga

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