KEGG   Clupea harengus (Atlantic herring): 105913190
Entry
105913190         CDS       T09045                                 
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
  KO
K15516  fragile X mental retardation protein
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:char03019]
    105913190 (fxr1)
Messenger RNA biogenesis [BR:char03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     105913190 (fxr1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     105913190 (fxr1)
   mRNA cycle factors
    Stress granule specific factors
     105913190 (fxr1)
SSDB
Motif
Pfam: FXMRP1_C_core FXR_C1 KH_9 Tudor_FRX1 FXR_C3 KH_1 Agenet KH-I_KHDC4-BBP Tudor_2
Other DBs
NCBI-GeneID: 105913190
NCBI-ProteinID: XP_012697673
Ensembl: ENSCHAG00000019921
UniProt: A0A6P3WFI2
LinkDB
Position
10:complement(4590110..4599962)
AA seq 686 aa
MEELTVEVRGSNGAFYKGYVKDVQEDSLSISFENNWQPERQFPFTDVRLPPPPDAKKEIG
EGDEVEIFSRANDQEPCGWWLAKVRMTKGDFYVIEYAACDATYNEIVTFERLRPVNQNKP
VTKNSFFRCTVPVPDDIKAACESEQAHKDFKKAVGASRIFYSPEKTQLVVLSKNESTVKR
VPLLSDMHLRSIRTKLMLMSRNEEATKHLESTKQLASAFQEEFNVREDLMGLAIGSHGSN
IQQARKVPGVTAIELDEQSGTFRIYGESAEAVQKARSYLEFVEDSVQIPRNLVGKVIGKN
GKVIQEIVDKSGVVRVRIEGDNDNKLPRQELLSCHKTQGTVPFTFVGTKESIGNVQVLLE
YHIAYLNEVEQLRIERLQIDEQLRQIGMGYRPQPGRPGDKDKGYTTDDAISNMPLHNSRS
YSGRGRGRRGPNYTSGYGTNSDQSNASETESDRKDELSDWSLAAEEPERGQRQQRDSRRR
PGPARGRGAPWGRGRGGGRGGSTSISSVLRDPDGNPYSLLDNTETDQTADTDASDSHANS
TGNRRRRSRRRRTDEDATLIDGMSESDNASLSENGLDDSEAKTQRRNRSRRGQFRPPEER
QPVTVADYISRAESSSRQRNPRDMKKKKDLGQVDSIAEHSPSATPSNGPSNKGGDTGKGQ
RVSAERASKVSYQDNGKKQAVMNGIS
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggaggaactgacagtggaggtccgaggctccaacggagctttttacaagggctatgtc
aaggatgttcaagaagattcactctccatttcctttgaaaataactggcaaccagagaga
cagtttcccttcactgatgtccggttgccgcctcctcctgatgccaagaaggagattgga
gaaggggatgaagtggagatcttctcccgagcgaatgatcaggaaccttgtggctggtgg
ctagctaaagtccgcatgactaaaggagatttttacgtgattgagtatgcggcctgtgat
gccacctacaacgaaatagtcacatttgaacgcctcaggcctgtgaaccaaaacaagcct
gtgacaaaaaacagcttcttcaggtgcaccgttcccgttcctgacgatataaaagcagcg
tgtgagagtgaacaggcacacaaggacttcaaaaaggcagtgggagccagccggatattt
tacagtcctgaaaaaacccagttggtagttttgtccaagaacgaatccacagtcaagcgc
gttcccctgctcagtgacatgcacctgaggagcatccggactaagctgatgctgatgtcc
aggaacgaggaggccacaaaacacctagagagcacaaagcagctggcctcagccttccag
gaggagttcaatgttcgtgaggacctgatgggcctggctattgggagccacgggagcaac
atccagcaggccaggaaggtccctggagtgactgccatcgaattggatgagcaaagtggc
acgttcaggatttacggagagagtgctgaagctgtgcagaaggccagaagctatcttgag
tttgtggaggactctgtccagatacccaggaatttggttggcaaagttattggcaaaaat
gggaaagtaatccaggagattgttgataagtcaggggtggtgagggtacgcattgaaggg
gacaatgacaataaactccctcgacaagagcttctctcatgtcacaagacacagggaacg
gtcccgttcacctttgtcggcacaaaggagagcattgggaacgttcaggttctgctggag
taccacatcgcctaccttaatgaggtggaacagctgcgtattgagcgcctgcagattgac
gagcagctccggcagattggcatgggttacagaccccagcccgggcgtccgggagataag
gacaagggctacaccacggatgacgccatctccaacatgcccctccacaacagccgctcc
tactctggcaggggccgtgggcgcaggggccccaactatacgtctggctatggcaccaac
tccgatcagtccaatgcctctgagaccgagtcggaccgcaaggacgagctgagtgattgg
tccctggcggccgaggagccggagcggggccaacggcagcagagggacagccgccggagg
ccaggccctgcacgcggccgaggggcaccctggggtagaggccgtggaggaggaagaggc
ggctcgacctccattagctctgtgcttcgtgaccctgacgggaacccttacagcctgctg
gacaacaccgagaccgaccagacggccgacacagacgcaagtgattctcacgccaacagt
acaggaaaccgccgccgcaggtctcgccgccgccgcactgacgaggacgccaccctgatc
gatggcatgagcgagtctgacaacgcctcgctcagcgagaacggcctggatgattcagag
gcaaagacgcagcgacgtaaccgtagcaggcgtggccaattccgccctcctgaggagagg
cagccagttacggtggcggattacatatcacgtgctgaatcgtcaagccgacagaggaac
ccaagagatatgaaaaagaagaaagatttgggtcaagtggactccattgcagagcacagc
ccctccgcaaccccgagcaatggccctagcaacaaaggtggggacactggcaaaggtcag
cgagtctctgccgaaagggcatcaaaagtcagctaccaggacaacggaaagaagcaggcc
gtcatgaacgggatctcttaa

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