Clupea harengus (Atlantic herring): 105913199
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Entry
105913199 CDS
T09045
Name
(RefSeq) eukaryotic initiation factor 4A-II isoform X1
KO
K03257
translation initiation factor 4A
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105913199
03012 Translation factors [BR:
char03012
]
105913199
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105913199
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105913199
mRNA cycle factors
Stress granule specific factors
105913199
Translation factors [BR:
char03012
]
Eukaryotic type
Initiation factors
eIF-4
105913199
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105913199
Exosomal proteins of bladder cancer cells
105913199
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Flavi_DEAD
NAT10_TcmA_helicase
AAA_22
tRNA-synt_1b
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
105913199
NCBI-ProteinID:
XP_012697692
Ensembl:
ENSCHAG00000013854
UniProt:
A0A6P3WG45
LinkDB
All DBs
Position
10:complement(4300920..4307741)
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AA seq
411 aa
AA seq
DB search
MSGDSADYNSSRDRDHGGPDGMEPDGVIESNWNEITDNFDDMNLKETLLRGIYAYGFERP
SAIQQRAIIPCIKGFDVIAQAQSGTGKTATFAISILQQLAIEQKETQALVLAPTRELAQQ
IQKVILALGDYMGATCHACIGGTNVRNEMQKLEAEAYHIVVGTPGRVFDMVNRGYLSPKW
IKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPSDVLEVTKKFMRDPIRIL
VKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHAR
DFTVSALHGDMDQKERDVVMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNREN
YIHRIGRGGRFGRKGVAINFVTEEDKRILRDIESFYNTTVEEMPLNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcgattctgctgattataacagctccagagatagagaccatggaggcccagat
ggaatggagcctgatggtgtcatcgagagcaactggaatgagatcacagacaactttgat
gacatgaatctgaaagaaaccctcctgaggggaatctatgcctatggttttgagaggcca
tctgcgattcagcagcgggcaatcattccatgcatcaagggttttgatgttattgctcag
gcccagtcaggcacaggaaagacagccacttttgccatttccatcctgcagcagctggcg
attgagcagaaagagactcaagctctggtactggctccaaccagggagctggcccagcag
atccagaaagtcattttggctctgggtgactacatgggggccacctgtcatgcctgcatt
ggtggtacaaatgtacgcaatgagatgcagaaactcgaggcggaggcttatcacatagtg
gtagggacccccggccgtgtcttcgacatggtgaaccgcggatacctttctcctaagtgg
atcaagatgttcgttttggatgaagctgatgaaatgttgagtcgaggattcaaggatcag
atatacgaaatctttcaaaagttgagcaccaacatccaagttgtgcttctctcggccacc
atgccatctgacgtgctggaggtgaccaagaagttcatgcgggatccaatccgcatcctg
gtgaagaaggaggaacttacccttgagggtattaagcagttctacatcaatgtggagaga
gaggagtggaagctggacaccctctgtgatctgtatgagactctgacaatcacccaagcc
gtgatcttcttgaacacgaggaggaaggtggactggctgacagagaagatgcacgccagg
gacttcaccgtctctgccttgcacggagacatggaccagaaagagcgcgatgtggtcatg
cgggagttccgctccggatccagcagggtcctgatcacaactgatttgctggctcgtgga
attgacgtgcagcaagtctctctagtcatcaattatgaccttcccacaaaccgagagaac
tacatccatagaattggacgtggtggccgtttcggcagaaaaggagttgcaattaacttt
gtaaccgaggaggacaagaggattcttcgggacatcgagtccttctacaatactactgtt
gaggagatgcctttgaatgtggctgatctgatttaa
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