Clupea harengus (Atlantic herring): 105913200
Help
Entry
105913200 CDS
T09045
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03030
DNA replication
char03410
Base excision repair
char03420
Nucleotide excision repair
char03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105913200 (rfc4)
03410 Base excision repair
105913200 (rfc4)
03420 Nucleotide excision repair
105913200 (rfc4)
03430 Mismatch repair
105913200 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105913200 (rfc4)
03036 Chromosome and associated proteins [BR:
char03036
]
105913200 (rfc4)
03400 DNA repair and recombination proteins [BR:
char03400
]
105913200 (rfc4)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105913200 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
105913200 (rfc4)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105913200 (rfc4)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105913200 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
105913200 (rfc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
AAA_lid_RFC1
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_assoc_2
AAA_16
AAA_11
Mg_chelatase
AAA_22
AAA_30
SLFN-g3_helicase
DUF815
AAA_14
ResIII
AAA_24
RuvB_N
AAA_5
Gp44_lid
AAA_19
AAA_28
AAA_7
DUF5338
Motif
Other DBs
NCBI-GeneID:
105913200
NCBI-ProteinID:
XP_012697693
Ensembl:
ENSCHAG00000013734
UniProt:
A0A6P3WFJ8
LinkDB
All DBs
Position
10:4293585..4300509
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGTSSQSIKLQKDKAAGSSGEKKPKAVPWVEKYRPKCVDDVAYQEEVVAVLKKSL
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVRKKVKTF
AQLTAAGSRPDGKPCPPFKIIILDEADSMTNAAQACLRRTMEKEARTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANGIQEERILEICKKENLKYTQQGIDELVRVSEGDLRKAITYLQ
SAARLNADAEITESIILEIAGVVPPNVIDNLLQICHKGTFDKMQIEVKNMIDDGYAATQI
LNQLHDCIIEGHLNDKQKSVVAEKMAVVDKNLADGADEYLQLMSLTSVIMQQATQSS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgtttctgaaaggaacatccagccagagcatcaagcttcagaaggacaaagca
gctggatcgagtggggaaaagaaacccaaggctgtaccatgggtagagaaatatagacca
aagtgtgtggatgatgtggcctatcaagaggaggtggttgctgttttgaagaaatcattg
gagggcgccgatttgcccaatttactgttctatgggcctcccggtacaggaaagacctcc
accatcctggcagcagctagagagctctatggacctgagctgtaccgacagcgggtgttg
gagctcaacgcctctgatgaacgagggatccaggtggtccgaaagaaagtgaagaccttt
gcccagctaactgcagcaggatctcgtcctgacgggaagccttgtcctccgtttaagatc
atcattcttgacgaggcggactccatgaccaacgcagcccaggcctgcctcagacgcacc
atggagaaggaggcgcgcaccacacgcttctgcctcatctgcaactacgtcagcaggatc
attgaaccgctgacatccagatgctccaagttccgtttcaagcctcttgccaatggcatc
caggaggagagaatcttagaaatctgcaagaaggagaacctgaagtacacccaacaggga
attgatgagctggtgagggtgtcggagggagatctgaggaaagccatcacatatttacag
agtgcagccaggctcaatgcagatgcagagatcacagagagtatcatattagagatcgct
ggggtggtaccccctaatgtcatagacaatctgcttcagatatgtcacaaaggaactttt
gataaaatgcagatagaagtcaagaatatgattgatgatggctatgctgctacacagatt
cttaatcagctacatgactgcatcatcgagggccacctcaatgacaagcagaaatcagtc
gttgctgaaaaaatggcggtggttgataagaatttagctgatggagctgatgaatatctg
cagttgatgagtctgacctcagtgataatgcagcaagcaactcagagctcctga
DBGET
integrated database retrieval system