Clupea harengus (Atlantic herring): 105913210
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Entry
105913210 CDS
T09045
Symbol
pomgnt1
Name
(RefSeq) protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1
KO
K09666
beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00515
Mannose type O-glycan biosynthesis
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
105913210 (pomgnt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105913210 (pomgnt1)
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
105913210 (pomgnt1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GNT-I
ILEI
Motif
Other DBs
NCBI-GeneID:
105913210
NCBI-ProteinID:
XP_031430825
Ensembl:
ENSCHAG00000020111
UniProt:
A0A6P8G6A8
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Position
10:complement(2265575..2281446)
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AA seq
653 aa
AA seq
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MDTWTPNPRAKPFIPRHQRSFYLSWKYKLSNKRSIRRFCQAGAVLFLLVTVIVNIKLILD
TRRVANEEEAAHEYDDVLPNMETPRRPSSGRKVLDIEVYSSRSKVYVAVDGTTVLEDEMR
EQGRGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMILFLNMVTRGRVLIFTVKDEGTFHL
KDSAKNLLKGLGSPVAINLSWRDMWTWVVKKGGQVYGEKHSKSPALSTWGDPVLLKTEVQ
LTASEEAECHWADTEMNRRRKLFCSKVEGYGSICSCKDPAPIEFSPDPLPVNNILNVPVA
VIAGNRPNYLYRMLRSLLSSHGVNPQMVTVFIDGYYEEPMDVVELFGLKGVQHTPISIKN
ARVAQHYKASLTATFNLHPEADFAIVLEEDLDISIDFFSFLSQTLHLLKEDDSLYCISAW
NDQGYEHTAEDPALLYRVESMPGLGWVLKKSLYKDELEPKWPTPEKLWDWDMWMRMPEQR
KGRECVIPDVSRSYHFGIIGLNMNGYFHEVYFKKHKFNTVPIVQMKNVESLKKDAYELEI
QNLLREAEVLDHSKNPCEDSFIPDTEGKTYVMFIKMEQETDTNTWTELAKCLHVWDLDVR
GNHRGMWRLFRKKNQVLVVAVPISPYSSKMPPNITPIHLEPPPKEEGAPVEQM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggacacctggacgccaaatccccgagccaaacctttcatcccgcgccatcaacgcagc
ttctacctctcttggaagtacaaactcagcaacaagagatcaatacgacggttctgccag
gctggtgcagtgctgtttttactggtgacagtcatcgttaatatcaagcttatattagac
accagaagagtagccaacgaggaagaggctgcccacgagtatgatgatgtgctgcctaac
atggaaacccctagaagaccgtccagtggccgcaaggttcttgatattgaggtgtactcc
agccgctcaaaagtctatgtggcagtggatggaaccactgttcttgaggatgagatgcga
gagcaggggagaggtatccatgtgatcgtcctcaaccaggccactggtcatgtcatggcc
aagcgggtgtttgacacgtactctcctcacgaggatgaagccatgatcctcttcctcaac
atggtgacgcgtggcagggtgctgatcttcactgttaaggatgaaggaacgtttcacctg
aaggattcagcgaagaacctgctgaaaggtctgggcagcccggtagccatcaacctcagc
tggagggacatgtggacctgggtggtcaagaaaggaggtcaggtgtatggagagaaacac
tctaaatccccagcgctctccacctggggtgaccctgtgctgctgaagactgaggtgcag
ctcactgcatcagaggaggctgagtgccattgggcagacaccgagatgaaccgccggcgg
aagctcttctgcagtaaggtggagggctacgggagcatctgcagctgcaaggaccctgct
cccattgagttcagccctgacccattgcccgtcaataatatccttaatgtgccagtggca
gtgatagcagggaacaggccaaactatctatacaggatgttgcgctcactgctctcctcc
catggagtgaaccctcagatggtcacagtcttcatagatggctactatgaggagcctatg
gacgtggtggagctcttcggccttaaaggggtccagcacacacccatcagcatcaagaac
gcacgggtggcacagcactacaaggccagcctgactgctactttcaacctccaccctgag
gctgactttgccattgtgctggaagaggatctggatatttccattgatttcttcagcttc
ctcagccagaccctccatctgctgaaagaggatgacagtctgtactgcatctcagcctgg
aatgaccagggctatgagcacacggccgaggaccccgctctgctgtaccgcgtggagagc
atgcctggcctgggctgggtgctcaagaagagcctctacaaagacgagctggagcccaag
tggcccacgcctgaaaagctgtgggactgggacatgtggatgcgtatgccggagcagagg
aaggggagagagtgtgtgattccagatgtgtctcgctcctaccactttggcatcatcggc
ctcaacatgaacggatacttccatgaagtgtattttaagaagcacaagttcaacactgtg
ccaattgttcagatgaagaatgtggagagcctgaagaaggacgcctatgagctggagatc
caaaacctgttaagggaggctgaggttctggaccacagtaagaacccctgtgaggactct
ttcatcccagacactgaggggaaaacgtacgtcatgtttatcaagatggagcaggagaca
gacaccaacacttggactgagttggccaagtgtctgcacgtgtgggacctggatgtgcga
ggtaatcacagaggcatgtggcgcctcttcaggaagaagaaccaggtcctggttgtggcg
gttcccatctctccttactcgtctaagatgccccccaacatcacgcccatccacttggag
cccccacccaaggaggagggggcccctgtggagcagatgtag
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