Clupea harengus (Atlantic herring): 105913225
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Entry
105913225 CDS
T09045
Symbol
ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105913225 (ddx17)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105913225 (ddx17)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105913225 (ddx17)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
105913225
NCBI-ProteinID:
XP_031419841
Ensembl:
ENSCHAG00000006115
UniProt:
A0A6P8F6Z0
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All DBs
Position
26:complement(7206416..7217646)
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AA seq
643 aa
AA seq
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MRGGSSYGDRDRDRGRDRGPRFGSSSRRSPPPPKFGNPGDRLRKKKWNLDELPKFEKNFY
SEHLEVQRMTQYDVEEFRRKKEITIRGSGCPKPVMHFHQAQFPQYVIDVLLHHNFKEPTP
IQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVASDYGKSSRTKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDSVQ
INVGALELSANHNILQIVDVCMETEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDELTR
RMRRDGWPAMCIHGDKTQPERDWVLSEFRSGKAPILIATDVASRGLDVEDIKFVINYDYP
NSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQVRDLVRVLEEARQAINPKLLQLVGSGR
GGGGGGGGGRMRYRSSVSNSDNPNMMFQDACERRMLGGSKDSRGNSSNFSRDGRSAGVSR
DSDRSTSSSYRGRSGYNDQFQGYGSRGGGSQSGGGGGGGGGQEPSGPPQGPFGQPPPPPA
QGGSGPKPLMAQQFPPPPQPMMGFIGQGPYPFAPPPPPPPPRK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaggctcgtcgtatggggacagggaccgggaccgtggacgagacagagggcca
cgctttgggtccagcagccgaaggagtcccccacctccaaagtttggcaatcctggtgat
agactgcggaagaagaaatggaacctggatgagctacccaagtttgagaagaacttttat
agcgaacacctggaggtccagcgaatgacacagtatgatgtggaagagttccgccgcaag
aaagagatcacaatcagaggctctggctgccccaaacccgtcatgcacttccatcaggcc
cagttcccccagtatgtaatagatgtgctgttgcaccacaactttaaggagcccactcct
atccaagcacaggggtttcccctggcactgagtggcagagacatggtgggcatcgcccag
acgggatctggaaagaccctggcatatctcctcccagccattgtacacatcaaccatcag
ccttacttggagagaggcgatggacctatttgtcttgtcctcgctcccactcgagaactc
gcacagcaggtgcagcaggtggcctctgactatgggaagtcgtcccgcaccaagagcacc
tgtgtgtacggaggggcccccaaagggccacagatacgggacctggagagaggggtggag
atctgcattgccacgccaggtcgtctcattgacttcctggaggtcgggaagaccaacctg
cggcgctgcacgtacctggtgctggacgaggctgaccgcatgctggacatgggcttcgag
ccccagatccgcaagatcgtggaccaaatccgtccggaccgacagactctgatgtggagc
gccacctggcccaaagacgtgcgccagctggcggaggacttcctgcgggactccgtgcag
atcaacgtgggcgccctggagctgagcgccaaccacaacatcctgcagatagtggatgtg
tgcatggagacggagaaggacaacaagctgctccagctaatggaggagataatggctgag
aaggagaacaaaaccatcatcttcgtggagacgaagaagcgctgcgatgaactgacacgc
cgcatgcggagggatgggtggcctgccatgtgtatccatggtgataagactcagccagag
agagactgggttttgtcagagttccgtagtggcaaagctcctatcctcattgccacagat
gtggcctctcgtgggctggatgtggaggacatcaagttcgtcatcaactacgactacccc
aactcgtccgaggactacgtgcaccgcatcggccgcacggcccgcagcaccaacaagggc
acggcctacaccttcttcaccccaggcaacctgcggcaggtgcgggacctggtgcgcgtg
ctggaggaggcgcgccaggccatcaaccccaagctgctgcagctggtgggctctggccgt
ggaggaggaggaggaggaggaggtggtaggatgcgctaccgtagcagtgtctccaactcg
gacaaccccaacatgatgttccaagatgcgtgtgagcggcgaatgctcggcggctcaaag
gacagccgtggaaacagctccaatttcagccgcgatggacgctctgctggcgtcagccgc
gactccgaccgctccacttcctcgtcttacaggggccgcagcggctacaacgaccagttc
cagggttacggctccagggggggtggctcccagtcaggtggaggtggaggagggggcggc
gggcaggagccctcagggccaccacagggccccttcggccagccccctcccccacctgcc
cagggcgggtctgggcccaagcctctcatggcgcagcagttccccccgcccccccagccc
atgatggggttcataggtcagggcccttacccattcgcaccacctccccctcccccacca
cccaggaagtaa
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