Clupea harengus (Atlantic herring): 105913226
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Entry
105913226 CDS
T09045
Symbol
gga1
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
105913226 (gga1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105913226 (gga1)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Others
GGA
105913226 (gga1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
ATG17_like
CEP70
HEAT_Maestro
Ferritin
Hrs_helical
PCRF
Ran-binding
cas_Cpf1_2nd
Motif
Other DBs
NCBI-GeneID:
105913226
NCBI-ProteinID:
XP_012697722
Ensembl:
ENSCHAG00000004328
UniProt:
A0A6P3WG26
LinkDB
All DBs
Position
26
Genome browser
AA seq
655 aa
AA seq
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MAAPPDEGSLESRINKATNPLNRETDWESIQAFCERLNNEPDGPQLATRLLAHKIQSPQE
WEAMQALMVLETCMKSCGKRFHSEVGKFRFLNELIKVVSPKYLGSRAPEPVKKKVLEVMF
SWTLTLPEETKISDAYQMLKKQGIVKQDPALPDDGPLPLPAARPKNAIFEDEEKSKMLAR
LLNSTHPEDLRAANKLIKEMVQEDQKRMEKVSKRVNAIQEVKESVGLLTQLLGDYSKESV
ENNEELIKDLYQRCEKMRPTLFRLASDTEDNDEALAEILQANDSLTQVINLYRQLVKGEE
VNGDSSTMPQLTGSSTALLDLSGLDTSPSAPTVPEFPSQPTPSQEIGMSLLDDELMSLGL
TDVAPAISNLASQSGDATTWNSFQSSDSVETPAPVAPAAVLLPSVTAAPAAPATVAPLAS
RALDELDLLGKTLLQQSLPPESQQVKWDKLQSHSRPTLRDLQTKTTTNPSPTPSPILTLA
SEQPGTLLDSQAGIGAPSLGLTTSSSPQNDISLANVIVPLESIKPSSMLPVTIFDKHSLR
VLFHYARDSPPSRPDVLVVIISMLSSAPIPITNIRLQSAVPKTMRVKLQPPSGTELPAFN
PILPPAAITQVLLLANPHKEKVRLRYKLTFDLGEESHDESGDVEQFPPPENWGDL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgccagacgaggggagcttggagtctcgcatcaacaaagctacgaaccca
ctcaacagagagactgactgggagagcattcaagctttctgtgaacgactgaataatgaa
cctgacggtcctcagctggccaccaggcttctggcccacaagatccagtcgccccaggag
tgggaagccatgcaagcactaatggttctagaaacatgcatgaagagctgtgggaaaagg
ttccatagtgaggtggggaagttccgcttcctgaacgaactcatcaaagtagtctctccc
aagtatttaggctcgcgtgccccagaacccgtgaagaagaaagtgctggaggtcatgttc
agctggaccttgacactgccagaggagactaaaatctctgatgcttatcagatgctgaag
aagcaaggcattgtgaagcaggaccctgcacttcctgatgacggacccctcccactacca
gcagccagacctaagaacgccatctttgaggatgaggagaagtcaaagatgctggcgcgc
ctgttgaacagcactcaccccgaggacctgcgggccgccaacaaactcatcaaggaaatg
gtgcaggaagaccagaagcggatggagaaggtgtccaagcgggtgaacgccatccaggag
gtgaaggagagcgtggggctgctgacccagctcctgggagactacagcaaggagagcgtc
gagaacaacgaggagctgatcaaggacttgtaccagcgctgtgagaagatgaggcccaca
ctgttccgtctagccagcgacacagaggacaatgacgaggccttagcggagatcctgcag
gccaatgacagcctgacccaggtgatcaacctctacaggcagctggtgaagggtgaggag
gtcaacggggacagctccaccatgcctcagctcacaggaagtagcactgctctgctggac
ctgtcaggccttgacacttcaccctctgctccgactgtcccagaattcccctctcagccc
accccctcacaggaaattggcatgagcctgctggatgatgagctcatgtcgctaggtttg
actgatgttgcccctgcaatctctaacctggcttcccagtctggggatgccacaacatgg
aactcttttcagtcctctgatagtgtcgaaacacctgctccggtggcgcctgcagcggtg
ctgttgccatcggtgacggcagcacctgcagccccagcgaccgtggccccgcttgcctcg
agggccctggatgagctggacctgctgggcaagacgctgctgcagcagtcccttccccca
gagagccagcaggtgaaatgggacaaacttcagtctcactccagacccacactccgcgac
cttcagaccaagaccaccacaaaccccagcccgacgcccagtcccatcctgaccctggcc
tccgagcagcctgggactctcctggactctcaggctggcattggagctccctcgctaggc
ttgaccactagctcttctccccagaatgacatttccttagctaatgtgattgttcccttg
gagtccatcaaacccagtagcatgttgcctgtgacgatatttgacaaacacagtttgcgg
gtgttatttcactacgcacgggacagtcccccgtcacggccggacgtgctagtggtcatc
atctccatgctgtcctccgcccccatacccatcaccaacattcgcctccagtcggccgtc
cccaagactatgagggtgaagctgcagcccccatcgggcacggagctgcccgccttcaac
cccatcctcccccccgccgccatcacccaagtcctgctgctggctaacccccacaaggag
aaagtgcgattgcggtacaagctcaccttcgatctaggagaagaatcacatgatgagtct
ggggacgttgaacagtttccacccccagagaactggggggacctttag
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