Clupea harengus (Atlantic herring): 105913274
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Entry
105913274 CDS
T09045
Symbol
hapln1b
Name
(RefSeq) hyaluronan and proteoglycan link protein 1
KO
K06848
hyaluronan and proteoglycan link protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
105913274 (hapln1b)
Glycosaminoglycan binding proteins [BR:
char00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
105913274 (hapln1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Xlink
V-set
Ig_3
Chordopox_A33R
I-set
Ig_2
ig
Motif
Other DBs
NCBI-GeneID:
105913274
NCBI-ProteinID:
XP_012697774
Ensembl:
ENSCHAG00000021435
UniProt:
A0A6P8GG72
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Position
12:3866092..3884139
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AA seq
354 aa
AA seq
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MNALLLFALFSLSIAQNFEDAYSDLESYNLRTIYITENGPKLSVVTDQAKVISRRGGNAT
LPCRFQRDPAAGPNPKLRIKWTKLTADYLKEVDVFVAMGYHKRSYGRFHGRVHLQGDGDS
DASLVINDITLEDYGRYKCEVIDGLEDGTVVISLDLQGVVYPYFPRLGRYNLNFHDAEKA
CQDQDAVVASFDQLYDAWRGGLDWCNAGWLSDGSVQYPITKPREPCGGKNTVPGVRNYGK
RDKDKNRYDVFCFSSNFNGQFYYLIHPGKLTYDEAVQACQRDGAQLAKVGQMYTAWKLLG
YDRCDAGWLADGSVRYPISRPRRRCSPDEASVRFSGYPDRKHKLYGAYCFKGHN
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctttgctgctcttcgctttgttctcgttgagcattgcacagaacttcgaagat
gcttacagtgacctggaatcctataatctcaggaccatctacattacagaaaatggccca
aagctctcagtggtgacagaccaagccaaggtcatctctcgtcgagggggcaatgcaaca
ctgccgtgccgcttccagcgggaccccgccgctgggccgaaccccaagctgaggatcaaa
tggactaagctcaccgcagactacctgaaggaggtcgacgtcttcgtcgccatgggttac
cacaaaaggagctacgggaggttccacggacgagtgcatcttcagggagacggcgacagc
gatgcctctctggtcatcaatgacatcaccctggaggactatgggagatacaagtgtgaa
gtcattgatgggctagaggatggcactgtagtgatctccctcgacctacaaggtgtggtg
tacccatatttcccacggctgggtaggtacaatctgaacttccatgacgcagaaaaggcc
tgtcaggatcaggatgctgtggtggcctcgttcgaccagctgtatgacgcctggagagga
ggtctggactggtgtaacgcggggtggctgagcgacgggtccgtgcagtaccccatcacc
aaacccagagagccctgcgggggcaagaacactgtgccaggagtgaggaattatgggaag
cgcgacaaggacaagaaccgctacgacgtcttctgtttctcatcgaacttcaatggtcaa
ttctactacctgatccaccctggcaagctgacgtatgacgaggcggtacaagcgtgccag
cgcgacggtgcccagctcgccaaggtgggccagatgtacaccgcctggaagcttctgggc
tacgaccgctgcgacgcaggttggctggcggacgggagcgtgcgctaccccattagccgt
ccccgtcgccgctgcagcccggacgaggccagcgtgcgcttctctggctaccccgatcgc
aagcacaagctctacggtgcctactgcttcaagggccacaactga
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