KEGG   Clupea harengus (Atlantic herring): 105913294
Entry
105913294         CDS       T09045                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1 isoform X2
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    105913294 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    105913294 (rev1)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    105913294 (rev1)
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C REV1_C UBM BRCT BRCT_2 POLH-Rev1_HhH IMS_HHH LIG3_BRCT PTCB-BRCT Cdd1 DUF7674 DUF1805
Other DBs
NCBI-GeneID: 105913294
NCBI-ProteinID: XP_012697796
Ensembl: ENSCHAG00000010090
UniProt: A0A6P3WGA2
LinkDB
Position
2:13677960..13704944
AA seq 1321 aa
MSDGWRKKASSDDGWGERGGYMAAKVYKLEEQFHLDAPRERQKEGNSSSIFSGVAIYVNG
YTDPTADELRRLMMLHGGQFHVYYSRSKTTHIIATNLPNSKINELRGEKVVRPEWITDSI
KAGRQLSYLQYQLYAKQKGLSFPSLCLRKLDQQDLAGANIHTFPHHSSSSSSKGGLPLPQ
KPSLSAPKPSHAGPGAGLPLLEPPAEQSQVSSRQVSSDAPHRDQEQGLKVNGSLRNPKGG
GIKLNGLHGEGQWEEHSLTSGRAKDSTLTNGHVHRFNGALKLTDMGHHPGGLTQDVQPEP
RASVGPEVDPYDGPRTPSPIPSHQPRTSPVTRHKRDSDSPSTQHQVPSLASPTNHDVSTF
SDPTPARPHPSDPGSRVRLNGSHHSGDPTHNHTHQDLSDQSVKPVARGGAEGGIISEFYS
YSRLHHISTWRSEFAEYVTSLQCRKRTAGGAVFSGKEKLKRLRAQRSSGVSSMPAPQVRQ
SCILHVDMDCFFVSVGIRHRPDLKGKPVAVTSNRGPGRVAQRPGTNPQLEFQYYQQKRNR
HQTDKTDGDLEMTPSPEDISEHCHGNGVAQDQASLSMAEIASCSYEARQAGVKNGMCFGQ
AKKLCPELKAVPYDFQAYKEVALAMFETLASYTHHIEALSCDEALVDATALLAEVGVTPD
ELASAIRADVMEKTGCSASVGMGSNILLARMATRRAKPNGQYLLRSEEVDDFIRDQSVTS
LPGVGRSMGSKLASLGVSSCGDLQQVSMARLQREFGPRTGQTLFRFCRGLDDRPVRSEKE
RKSVSAEMNYNIRFTKVEEAESFLNNLSMEVQKRLQGAGLKGRRVTLKVMMRKPGAPVEP
AKYGGHGICDNLARSVTLGQATDSGKLIAQEAIKLFHAMRLDVTDMRGVGLQVQLLDGGP
QAPAQDAQRSIRDLLQAPRRPSSNTTTSCTAAPNSTSSSTLSTSTALSDADAIPSGSSSG
ASFNQATSSSLMEPPTSLSDPIPSTSKGEPPPRTPNHAHSRLNLSIEVPSPSQVDRSVLE
ALPPELREQVERTWSRREEEEEEQPGASCSVTPPPLRDLDFSSSPPPDAHPPPGTLLLQI
PNQPGQTGSTGIILALPDFSQVDPDVFAALPKELQEELRSAYSRREGAQPQVEEKNPLLQ
LKQPAAGRTKRRYKRKNASPAKKGPSPLKRLHPGTSPAKSSPSKPPPPAFRLKDDPSGLK
TENGPSSSSMKPDVPEVLSKFIPRPVPTLAGACELSDIRTLLREWVTTISEPMEEDILQV
VKYCTELVEDKDLEKLDIIIKYMKRIMQQSVESVWSMAFDFIVDNVQVVVQQMYGSTLKI
T
NT seq 3966 nt   +upstreamnt  +downstreamnt
atgagtgatggatggaggaagaaagccagctctgatgatggttggggtgaaaggggaggc
tacatggccgctaaggtgtataagctggaggagcagtttcacctggacgcccccagagag
aggcagaaggagggcaactcttccagcatcttcagcggggtggccatctacgtcaacgga
tacacagaccccactgcagacgagctgcgcaggctgatgatgctgcatggcggccagttc
cacgtctactactcgcgctccaagaccacacacatcatcgccactaacctgcccaacagc
aagatcaacgagctgaggggggagaaggtcgtccgccccgagtggatcactgacagtatt
aaggcaggccggcagctctcctacctccagtatcagctctatgccaagcagaagggcctg
agcttccccagcctgtgcctgcgcaagctggaccagcaggatcttgccggagccaacatc
cacacgttcccccaccacagctccagctccagctctaagggaggcctccccctgccgcag
aagcccagcctcagtgcacccaaacccagccatgccggccccggagctggcctccccctc
ctggagccgcctgcagagcagagccaggtgtcgtcacggcaggtctccagtgatgcgccg
caccgtgatcaggagcaggggcttaaagtgaacggctcactacggaacccgaagggaggt
ggaatcaaactgaatggtctccatggtgagggccaatgggaggagcactctttaaccagt
gggagggccaaagactcgaccttgaccaatggccacgtccaccgcttcaatggtgcctta
aagcttacagacatgggccatcatcctggtggtttgacccaggatgttcagccagagccg
agggcctctgtaggcccagaggtagacccatatgatgggcccaggactccaagtcccatc
ccctctcaccaaccacgcacctctcctgtcactcgacacaaacgggactctgattcgccc
agcacccagcaccaagtcccgtctctggcatccccaaccaatcacgatgtgtccactttt
tctgatcctacccctgcaagaccacacccatccgacccggggagcagagtccgcttgaac
ggcagtcatcacagtggtgaccccacacataaccacacccaccaagacctcagtgaccaa
tcagtaaagcccgtagccagagggggagcagagggcgggatcatctcggagttctactcg
tactcgcggctccaccacatttccacctggaggagcgagtttgcggagtacgtcacctcc
ctgcagtgccggaagaggacagcaggaggcgccgtgttctctgggaaggagaagttgaag
aggctccgggctcagcgcagctcaggtgtgtccagcatgcctgcacctcaggtcaggcag
tcctgtatcctgcatgtggacatggactgcttctttgtttccgtgggaataagacacaga
ccagatctgaaagggaaacctgttgccgtgacgagtaaccgtggtcctggtcgtgtggcc
cagcggcccgggaccaaccctcagctggagttccagtactaccagcagaaacggaaccgc
caccagacagacaagaccgatggtgaccttgagatgaccccttcgcctgaggacatcagc
gagcattgccatggcaacggggtggctcaggaccaggcttccctctccatggcagagata
gcctcctgcagttatgaagccaggcaagcaggcgtgaagaatggcatgtgttttggccag
gccaagaagctgtgtccggagctgaaggcagtgccctatgacttccaagcctataaggag
gtggcactggccatgttcgagaccctggccagttacacccatcacatagaggcgctgagt
tgtgacgaggcgctggtggatgccaccgccctgctggccgaagtgggcgtcacacccgat
gagctggccagcgccatcagagccgacgtgatggagaagaccggctgctctgcctccgtg
ggaatggggtccaacattctcctggcgcgcatggccacgcggcgggccaagcccaatggc
cagtacctgctgaggtcagaggaggtggacgacttcatacgcgaccagtcagtcaccagt
ctgccaggagtgggtcgctctatgggaagtaagctggcgtctctgggcgtgagctcctgt
ggggacctgcagcaggtgtccatggcgcgcctgcagcgggagttcggaccgcggaccgga
cagacgctcttccgtttctgccgaggcctggacgaccggccggtccgcagcgagaaggag
aggaaatctgtctctgctgagatgaactacaacattcgcttcacaaaggtggaggaggcg
gagtcgttcctgaacaacctgtccatggaggtgcagaagcgcctgcagggggcggggctt
aaaggtcgcagggtcactctcaaggtcatgatgcgcaaacccggagccccggtggagccg
gccaagtacggaggccacggcatctgtgacaacctggccaggtcagtgacgttaggtcag
gccacagacagcggtaagctaatcgctcaggaggccatcaagctgtttcacgccatgcgt
ctggatgtgacggacatgcgtggcgtggggttgcaggtgcagctactggacggggggccc
caggcgcccgcgcaggacgcccagcgctccatcagggacctgctgcaggccccacgcagg
cccagcagcaacaccaccaccagctgcacggcagcccccaactccacctcaagtagcacc
ctgtccactagcactgccttatcagacgcagatgcaatacccagcggttcttcctcagga
gcatccttcaatcaggccactagttcctccctcatggaaccacccacgtctctctccgat
ccaatccccagtacgagtaaaggagagccgccgccccgcactccaaaccacgcccactcc
cgtctcaacctcagcatagaagtgccctcaccctctcaggtggatcgctccgtgctggag
gcgctgcctcctgagctgagggagcaggtggagaggacctggagcaggagggaggaggag
gaggaggagcagcccggtgcctcctgctccgttactcctcctcctcttcgggacttggac
ttctcctcctcgcctccccctgacgctcatccgccccctggcacgctgctgctgcagatc
cccaaccagcccggtcagacgggctccacgggcatcatactggcactgcccgacttctcg
caggtcgacccggacgtgtttgctgcactgcctaaggagttgcaggaagagctgcgttct
gcttacagccgtagagaaggtgcacaaccacaagtggaggagaagaaccctctgctgcag
ctcaagcagccggccgctggtaggaccaagcgccgctacaagaggaagaacgccagccct
gccaagaagggccccagcccactcaaaaggctccacccaggcaccagtcctgccaaatcc
agcccctccaagccccccccaccagcattccggctcaaggacgaccccagtggactgaag
acggagaacggtccatcttcatcgtccatgaagccggatgtcccagaggtgctctccaaa
tttatcccccgccccgtccccactttggctggagcctgcgagttgagtgacatcaggacc
cttctacgggaatgggtcacgaccatctcagagcctatggaggaggacattctgcaggtg
gtgaaatattgcactgagcttgtggaggacaaagaccttgagaaacttgacatcatcatc
aaatacatgaagaggattatgcagcagtcagtcgagtctgtgtggagtatggcctttgat
ttcatcgttgacaacgtgcaggtggttgtgcagcaaatgtatggcagcaccctgaagatc
acgtag

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