Clupea harengus (Atlantic herring): 105913299
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Entry
105913299 CDS
T09045
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03030
DNA replication
char03410
Base excision repair
char03420
Nucleotide excision repair
char03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105913299 (rfc3)
03410 Base excision repair
105913299 (rfc3)
03420 Nucleotide excision repair
105913299 (rfc3)
03430 Mismatch repair
105913299 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105913299 (rfc3)
03036 Chromosome and associated proteins [BR:
char03036
]
105913299 (rfc3)
03400 DNA repair and recombination proteins [BR:
char03400
]
105913299 (rfc3)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
105913299 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
105913299 (rfc3)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
105913299 (rfc3)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
105913299 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
105913299 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_22
AAA_16
AAA_11
ABC_tran
DUF2247
zf-HC2
Motif
Other DBs
NCBI-GeneID:
105913299
NCBI-ProteinID:
XP_012697803
Ensembl:
ENSCHAG00000011720
UniProt:
A0A6P3WFQ3
LinkDB
All DBs
Position
2:complement(14036549..14038661)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQANKLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEINTVASNYHLEVNPSDAGNSDRVVIQELIKTMAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSMSKVISPIRSRCL
AVRVPLPSVEEVCSVLTGICKKEGLLLPAELARQIAERSGRNLRKALLMCEACRVQQYPF
SADQEIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEVIMRGLVTELL
GNCDGHLKGEVVQMAAHYEHRLQMGSKAIYHLEAFVAKFMAIYKKFMEDGLDNLMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatgggtggataagtacagacctacatctctcgctaaattggactaccacaaa
gagcaggctaataaactcaaaaacctggtacaatgtggagactttccccacctcctagtt
tatggtccatctggcgcgggaaagaaaacacgcataatgtgtctgctgcgcgagttgtat
ggtgcaggtgttgagaaactccgcatcgagcaccagtctatcactgcaccttcaaagaag
aaaatagaaataaacacagtagcaagcaactatcacttggaagttaatcctagcgacgca
ggcaacagtgacagagtggtgatacaggagctgataaaaactatggcacagtctcagcag
attcagtccagcacgcagagggagttcaaggtggtcctgctgactgaggtggaccggctc
actaaagacgcccagcatgctctgcgtcgcaccatggagaagtacatgtccacatgccgt
ctgatcctctgctgcaactccatgtcaaaggtcatctcccccataaggagcaggtgtctg
gctgtgcgggttcctctgcccagcgtggaggaggtatgcagcgtcctgaccggcatctgc
aagaaggagggactgctgctccctgccgagctggccaggcaaatcgcagagaggtctggc
cgcaacctgcgcaaagccctgctgatgtgcgaggcatgtcgagtgcagcagtaccccttc
tcggccgaccaggaaatccctgaaaccgactgggaggtgtacctgagagagacggccaac
gccatcgtcagccagcagagcccgcagaggctgctggaggtgcgtgccaggctgtacgag
ctgctgacccactgcattccgccagaggtgatcatgagggggctggtgacagagctgctg
ggcaactgtgatgggcacctcaagggtgaggtggtccaaatggctgcccattatgaacat
cggcttcagatgggcagcaaagccatctaccacctggaggccttcgttgccaagttcatg
gctatctacaagaagttcatggaagacggcttggataatttaatgttctga
DBGET
integrated database retrieval system