KEGG   Clupea harengus (Atlantic herring): 105913299
Entry
105913299         CDS       T09045                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03030  DNA replication
char03410  Base excision repair
char03420  Nucleotide excision repair
char03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105913299 (rfc3)
   03410 Base excision repair
    105913299 (rfc3)
   03420 Nucleotide excision repair
    105913299 (rfc3)
   03430 Mismatch repair
    105913299 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:char03032]
    105913299 (rfc3)
   03036 Chromosome and associated proteins [BR:char03036]
    105913299 (rfc3)
   03400 DNA repair and recombination proteins [BR:char03400]
    105913299 (rfc3)
DNA replication proteins [BR:char03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105913299 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    105913299 (rfc3)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    105913299 (rfc3)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105913299 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    105913299 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA AAA_22 AAA_16 AAA_11 ABC_tran DUF2247 zf-HC2
Other DBs
NCBI-GeneID: 105913299
NCBI-ProteinID: XP_012697803
Ensembl: ENSCHAG00000011720
UniProt: A0A6P3WFQ3
LinkDB
Position
2:complement(14036549..14038661)
AA seq 356 aa
MSLWVDKYRPTSLAKLDYHKEQANKLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQSITAPSKKKIEINTVASNYHLEVNPSDAGNSDRVVIQELIKTMAQSQQ
IQSSTQREFKVVLLTEVDRLTKDAQHALRRTMEKYMSTCRLILCCNSMSKVISPIRSRCL
AVRVPLPSVEEVCSVLTGICKKEGLLLPAELARQIAERSGRNLRKALLMCEACRVQQYPF
SADQEIPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPEVIMRGLVTELL
GNCDGHLKGEVVQMAAHYEHRLQMGSKAIYHLEAFVAKFMAIYKKFMEDGLDNLMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttatgggtggataagtacagacctacatctctcgctaaattggactaccacaaa
gagcaggctaataaactcaaaaacctggtacaatgtggagactttccccacctcctagtt
tatggtccatctggcgcgggaaagaaaacacgcataatgtgtctgctgcgcgagttgtat
ggtgcaggtgttgagaaactccgcatcgagcaccagtctatcactgcaccttcaaagaag
aaaatagaaataaacacagtagcaagcaactatcacttggaagttaatcctagcgacgca
ggcaacagtgacagagtggtgatacaggagctgataaaaactatggcacagtctcagcag
attcagtccagcacgcagagggagttcaaggtggtcctgctgactgaggtggaccggctc
actaaagacgcccagcatgctctgcgtcgcaccatggagaagtacatgtccacatgccgt
ctgatcctctgctgcaactccatgtcaaaggtcatctcccccataaggagcaggtgtctg
gctgtgcgggttcctctgcccagcgtggaggaggtatgcagcgtcctgaccggcatctgc
aagaaggagggactgctgctccctgccgagctggccaggcaaatcgcagagaggtctggc
cgcaacctgcgcaaagccctgctgatgtgcgaggcatgtcgagtgcagcagtaccccttc
tcggccgaccaggaaatccctgaaaccgactgggaggtgtacctgagagagacggccaac
gccatcgtcagccagcagagcccgcagaggctgctggaggtgcgtgccaggctgtacgag
ctgctgacccactgcattccgccagaggtgatcatgagggggctggtgacagagctgctg
ggcaactgtgatgggcacctcaagggtgaggtggtccaaatggctgcccattatgaacat
cggcttcagatgggcagcaaagccatctaccacctggaggccttcgttgccaagttcatg
gctatctacaagaagttcatggaagacggcttggataatttaatgttctga

DBGET integrated database retrieval system