Clupea harengus (Atlantic herring): 105913315
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Entry
105913315 CDS
T09045
Name
(RefSeq) two pore calcium channel protein 2-like isoform X1
KO
K14077
two pore calcium channel protein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105913315
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
105913315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105913315
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
105913315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Ribosomal_L20
Motif
Other DBs
NCBI-GeneID:
105913315
NCBI-ProteinID:
XP_012697821
Ensembl:
ENSCHAG00000026108
UniProt:
A0A6P3WFR3
LinkDB
All DBs
Position
6
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AA seq
790 aa
AA seq
DB search
MSENEDQLPNPGRERTLNQELLIADCMETEPLLTGSIDQGPVDYGSKCEDGQRGPLSSKG
SSCPDPEASCRLHGDDDDVYIQQAVVFLEDAIQYRSINHRVDCRSLNLYRWYYSRLCQWG
LGTTIAVILGLAFFERPSSLSLTSDPRYRPAPWEPACGVTESIEMVCLCIFIVDFAVKSY
LIGWDELLKTKWLIGYILVIAASIIDWTLSISMLCDEALRVRRLIRPFFLLQNSSLMKKT
LKCLKRTLPEMASVILLLALHLCLFTMFGMLLFAKTENPEHNGEWETYFRDLPQALSSLL
VLLTTANNPDVMIPAYSLNRGYSIFFILFSVFGTYFLMNLLTAIIYNQFRGYLLISIQTS
IHRRRLGVQAAFVVLCCQGRAHTKLLTGEQDEQVQVAAVLEVMQRVQMKSYYRHAIIKKI
AADGCLTGQAFQRLFDELDKDQIKEHPPKPEYRQLYLQRLQNGISHYSVTVLGNALALAN
VICICTVLVLDSEKTVTERDDYLEVINCLFILFYVLEMALKIFALGWRGYLSYRSNIFDG
VLTILLLMLQISIFSVYKLPFCRRKEKHGLMSLWEMVRLINMLIVFRFLRIISDIKLMAL
VASTLVDLVKNLRAFAGILMVVYYVYAVLGIWLFQGAISPPAHDSISNSSMENISANFSM
ECGTYEQLEYWPNNFDDFASSLVMLYNIMVVNNWHVFTDAYTRYTTEWSKVYFVSWWLIS
SVMWVNLFIALILENFTYRWDRSHAFTVVDVERTAYQTSVQLMFREHVQEPTEEQLVATL
QQHPHLHLAW
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatgaagatcagttacctaacccgggaagggaacgcactctaaaccaggag
ttactaatcgcggactgcatggaaacggagcctcttttgacgggaagcattgatcagggt
cctgtagattacggctcgaaatgtgaggatggacaacgtgggccattaagcagtaagggg
tcgtcttgccctgaccccgaagcttcctgtcgtttacatggagatgatgacgatgtctac
attcaacaagctgttgtattccttgaagatgctatacagtatcgatcaatcaaccatcgt
gtggattgtcgttcactgaatttatatagatggtactactcaaggctctgccagtggggt
ctaggtaccaccatagcagtcatcctgggtctggctttttttgagaggccctcttccttg
tcccttacatctgatccacggtatcggcccgctccttgggagccagcttgtggcgtaacc
gagagcatagagatggtgtgcctctgcatcttcattgtggattttgctgtgaagagttac
ctaattggttgggatgagttactgaagaccaagtggctcattggctacatcttagtcatt
gcagcctcgatcattgactggacgttgtcgataagcatgctgtgtgatgaggccttgcga
gttcggagacttatccgtccattcttccttctgcaaaactcttccttgatgaaaaaaaca
ttgaagtgcctaaagcggaccctcccagagatggcaagtgtgatcctgctcctggctctc
cacctgtgtctctttacaatgtttggaatgttgctctttgccaaaacagagaatcccgag
cacaacggagagtgggagacctacttcagagacctgccacaggctctgtcgtcattacta
gtgctcctcactacggcaaacaaccccgacgtgatgattccagcgtactctctaaacaga
ggatattccatctttttcattctcttcagtgtatttggaacatattttctgatgaactta
ctcactgccattatatacaaccagtttagggggtacctgctgatatccatccagacgtcc
attcacaggaggcgtttgggtgttcaggcagcttttgtggtcctctgctgccagggccga
gctcacaccaaactactaacaggagagcaagatgagcaagtccaggtggcagctgtgctg
gaggtgatgcagagggtgcagatgaaatcttactacagacatgccatcataaagaaaata
gctgctgatggctgcctaacagggcaggcattccagaggttgtttgatgagctggacaag
gatcagataaaagagcatcctcctaagccagagtaccgtcagctgtacctacagcggctg
caaaatggaatcagtcactattctgtcacagtgttgggcaatgccctggctctggccaat
gtcatctgcatatgtactgttttagttctggactctgagaaaacggttacagaacgtgat
gattatttagaggtcatcaattgtctatttattttattttacgttttggagatggcatta
aaaatcttcgctcttgggtggagaggttacctgtcctacagaagtaatatctttgatggg
gtgctcaccattttactcttgatgctccagatttcaattttttccgtatacaagcttcct
ttttgtcgccggaaagaaaagcatggcctcatgtctctgtgggagatggttcggctgatc
aacatgcttattgttttccgttttctgaggatcatttctgacataaagttaatggctttg
gtggcaagcactttagttgacttggtgaaaaatctacgggcttttgcaggaatccttatg
gtggtttactacgtgtatgcggttctggggatttggctgttccagggggctatttctcca
ccagcccatgacagcatctccaattcaagcatggaaaacatatcagctaacttcagcatg
gaatgtggtacatatgagcaactggagtactggcccaacaactttgatgactttgcatct
tctctggtcatgctgtacaatatcatggtagtgaataactggcacgtgttcacagatgcc
tacacccgatataccacagaatggtccaaggtttacttcgtctcttggtggttaatctcc
tctgtaatgtgggttaacctgttcatcgcccttatactggagaacttcacataccgctgg
gaccgcagtcatgcattcactgttgtggatgtggagcgaacagcctaccagacctcagta
caactgatgttcagagagcatgtgcaggaacctacagaggaacagctggtggccactcta
cagcagcaccctcatctgcatctcgcttggtga
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