Clupea harengus (Atlantic herring): 105913391
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Entry
105913391 CDS
T09045
Symbol
gxylt1a
Name
(RefSeq) glucoside xylosyltransferase 1 isoform X1
KO
K13676
UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase [EC:
2.4.2.42
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
105913391 (gxylt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105913391 (gxylt1a)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.42 UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase
105913391 (gxylt1a)
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
105913391 (gxylt1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Bystin
CoV_S2_C
Motif
Other DBs
NCBI-GeneID:
105913391
NCBI-ProteinID:
XP_012697901
Ensembl:
ENSCHAG00000022694
UniProt:
A0A6P3WGC5
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Position
3:22358073..22367593
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AA seq
448 aa
AA seq
DB search
MRRYFRILLCCTLLVFFSALYVFSQFASSLETEGGFSERHAHRASSRGDYSGHEVKKVPG
KEGPADPGQYERCKSSVSVSYWNPNWRDSPGGCGMNCLMESACRHTADKPGSVQDVARVE
PMHLAVVACGSRLVETLAMLKSAVLFSSKPLQFHVFAEDELHSGFKEALDSWPAAFQAKF
NYSLYPITFPSENAREWKKLFKPCASQRLFLPLLLKDVDSLLYVDTDILFLQPVEEIWNF
LSQFNSSQLAGMAPEHEEPRIGWYNRFARHPYYGKTGVNSGVMLMNMTRIRATHFKNDMT
SVPLLWRELLMPLLQKYKLNITWGDQDLLNIIFHHNPEGLFVFPCQWNYRPDHCIYGSNC
AAAEQHGVFILHGNRGVYHNDKQPAFRAIYEAIQQFPFGGDPVGALLQPLEESLRDASHT
YCGRVGHLFTKRLRHSIEALRTAPLRKA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgctactttcgtatacttttatgttgcactctactggtatttttctctgcattg
tacgtattcagccaatttgcttcctcccttgagacagaaggtggattctccgagaggcac
gctcatcgagctagctctcgaggagattacagcggtcatgaagtcaagaaagtgcctggg
aaagaaggcccggctgatccgggacagtatgaaaggtgtaagagttcagtgtctgtgtca
tactggaatcccaattggcgagactcccctgggggttgtggaatgaactgcttaatggaa
tcagcgtgtagacacacagcagacaagccagggtctgtccaagacgtcgctcgagtggag
cccatgcacctcgccgtcgtggcctgtggctctcggctcgtggagactctggccatgctg
aagtctgcagtcctcttcagcagcaagcctctgcagttccacgtgtttgcagaggacgag
ctgcacagtggcttcaaagaggctcttgactcctggccagcagccttccaggccaagttc
aactactcgttgtatcccatcacctttccaagtgagaatgcaagagagtggaagaagctg
ttcaagccttgtgcatctcagcggctcttcttgcctctcctgctcaaagacgtagactcg
ctgctatatgtggacacagacatcctgttcctgcagccagtggaagagatctggaacttt
ctctcgcaatttaactctagccagttggcaggcatggcgcctgagcacgaggaacctcgt
attggctggtacaaccgctttgcccgccacccatactacggcaaaacaggcgtaaactct
ggagttatgctcatgaacatgacccgtatcagggccacacacttcaagaatgatatgacc
tcagttccactcctatggagggaacttctgatgccactcctgcagaagtataagctgaac
atcacatggggcgaccaagacctcctaaacataatattccaccacaatccagaggggctg
tttgtgttcccatgccagtggaattaccgtcccgaccactgcatctacggcagcaactgt
gccgccgcggagcagcacggagtcttcatcctccacggcaaccgaggcgtctaccataac
gacaagcagcccgctttccgagccatctatgaagccattcagcagttcccgtttggaggc
gacccagtcggcgctctgctgcagccccttgaggagtcgctccgggacgcctcgcacacc
tactgcggaagagtcggccacctgttcaccaagcggctccggcacagcattgaagctctc
cgcacagcccctctgaggaaagcctga
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