Clupea harengus (Atlantic herring): 105913424
Help
Entry
105913424 CDS
T09045
Symbol
dhtkd1
Name
(RefSeq) probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial isoform X1
KO
K15791
2-oxoadipate dehydrogenase E1 component [EC:1.2.4.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00310
Lysine degradation
char00380
Tryptophan metabolism
char00785
Lipoic acid metabolism
char01100
Metabolic pathways
char01210
2-Oxocarboxylic acid metabolism
Module
char_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
105913424 (dhtkd1)
00380 Tryptophan metabolism
105913424 (dhtkd1)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
105913424 (dhtkd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105913424 (dhtkd1)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
105913424 (dhtkd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
OxoGdeHyase_C
E1_dh
Motif
Other DBs
NCBI-GeneID:
105913424
NCBI-ProteinID:
XP_012697935
Ensembl:
ENSCHAG00000019216
UniProt:
A0A6P3WGC7
LinkDB
All DBs
Position
3:complement(23500534..23509871)
Genome browser
AA seq
927 aa
AA seq
DB search
MSALLKLNKLYNLSKYPVHSPRPLLACLYHTERGVYGYRPKQNDLSSKVLTSNHISALNE
DHGLARLVDAYRAHGHKAAKINPLLPDAPVLETVPEISALNGTLEGPLKTSGLRHFGRAE
ASLEEVLAYLDETYCGRISVEISQLESVQEREWMADRFEELKKENFSPEERRQLARLMLE
SQEFDHFLGTKFATVKRYGGEGAESMMGFFHELFRQAAYSGVTEVIMGMPHRGRLNLLTG
LLHFPPELMYRKMRGLSEFPENSPSIGDVLSHLTSSVDLDFGADHPIHVTMLPNPSHLEA
INPVTQGKARAREQIKQEGDYSPDNSAQPGDKVICLQVHGDASFSGQGIVPETFTVSNLP
HYRVGGSIHLIVNNQVGYTTPSERGRSSLYCSDVGKMVGCAVIHVNGDEAEDVLRATRLA
VEYQRKFRKDVIVDLLCYRQWGHNELDEPFFTNPAMYKIIRARKSIPDLYADLLVSEGLM
TAEERGQIRTTHYGMLNEKLANMTQYSPSSTNLQGRWGDLAEPQACISTWDTGVPAPLLQ
FVGAKSVAIPEDIHIHGHLRKTHVQARLQKLEEGTKLDWSTAEAMALGSLLCQGFNIRIS
GQDVGRGTFSQRHCMVVCQESNDMYIPLNHINPEQRAFMEVCNSPLSEEAVLGFEYGMSI
SQPKLLPIWEAQFGDFFNGAQIIFDTFISGGEAKWLLQSAIVILLPHGYDGAGPEHSSCR
IERFLQMCDSKEAGVDSDMVNMSVVNPTTPAQYFHLLRRQMIRDFRKPLIVAAPKTLLRF
SGAVSSLADLAQGTSFKPVLNDPSVNPSSVQRVLLCSGKHYYALLKQRESLPAAAQNTAL
IRVEELCPFPLEALQKELSKYTNAKEFIWSQEEPQNMGAWSFVAPRFEKQLACKLRLVSR
PPLPAPAVGIGMLHGQQQEAILTASFS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctccttaaattaaacaaattgtacaatctgtcaaaataccctgtccactct
ccacgaccacttttggcctgtctgtaccacacggaaaggggagtatatggttacagacct
aaacagaacgacttgagttccaaagtcttgacgagcaaccatatctccgcgctaaatgaa
gaccatggactggcacgactggtggacgcatatcgagcacatggacacaaagcagccaaa
attaacccattgcttcctgatgcgccggtgttggagacggttcctgaaatcagcgcgtta
aatgggacccttgaaggacccctcaagacaagcggtctgcgtcactttggaagagcagag
gcatcactggaagaagtacttgcatacctggatgaaacctactgtgggcgaatctctgtg
gagatcagccagctggagagtgtgcaggagcgggagtggatggcagaccgctttgaggag
ctcaaaaaggagaacttttctccagaggagagacgacagcttgctcggctaatgctcgag
tcccaggaattcgaccatttcttgggcactaagttcgctactgtgaagcggtatggaggt
gagggagcggagagcatgatgggattctttcatgagctgttccgtcaggcggcgtacagt
ggcgtgaccgaggtgattatgggtatgcctcatcgcggacgcctcaacctgctgacagga
cttctacatttcccaccagagctcatgtaccgcaaaatgcgcggcctcagcgagttccca
gagaactctccctccatcggcgacgtactctcgcatctgacctcctctgtggacctcgac
tttggggctgatcacccaattcatgtcaccatgctgcctaacccatctcaccttgaagcc
attaaccctgttactcagggcaaggcccgtgcccgagagcagatcaaacaggaaggggat
tattcccctgacaacagtgcccagcccggagacaaagtaatttgccttcaggtacacgga
gatgcctcattttcaggccaaggcattgtgccagaaacgtttacagtgtcaaatctacct
cactatagagttggagggagtattcacctcattgttaataaccaagtgggatataccact
ccctctgagagagggagatcatcattgtattgcagtgatgttggtaagatggttggctgt
gctgtgattcacgtgaatggtgacgaggctgaggatgtgcttcgggcaacaagacttgca
gtagagtatcagcggaagttccggaaggatgtgatcgttgatttgctgtgctatcgacaa
tggggacacaacgagctggatgaaccatttttcaccaatccagccatgtacaagattatc
cgggccaggaagagcattccagacttgtatgcggacctgctggtgtccgagggcctgatg
actgcggaggagcggggtcagatacggaccacccactatggcatgctgaacgagaagctg
gccaacatgacccagtacagcccgtcgtccaccaatctgcagggccgctggggggacctg
gcagagccccaggcctgcatctccacctgggacacgggcgtccccgcacccctgctgcag
tttgtgggcgccaaatcggtggccattcctgaggacatccacatacacggtcatctcagg
aagacacacgtgcaggcacggctgcagaagctggaagaaggaaccaaactggactggtcc
actgctgaagccatggctttgggctcactgctctgccaagggttcaatatccgtatcagt
ggacaggatgttgggagaggtacctttagccagcgccattgcatggtggtatgccaggag
tccaatgacatgtacatccctctgaatcacatcaacccagagcagagggcctttatggag
gtgtgcaatagccccctgtcggaggaggctgtactgggctttgagtacggtatgagtatt
tcccagcccaagcttctacccatttgggaggcccaattcggagacttcttcaatggagct
cagatcatcttcgataccttcatctccggaggggaggctaaatggctgttgcagagtgcc
atagtgatccttctgccacatgggtatgatggagctggaccagagcattcctcttgccgt
attgagcgttttttacagatgtgtgacagcaaggaggcgggtgtggacagtgacatggtg
aacatgtctgtggtgaaccccaccactccggcacagtacttccacctgctccggcgacag
atgatccgcgatttccgcaaacctcttattgttgccgcaccgaagacactgctaaggttc
tcaggtgctgtgtctagccttgctgacttggctcaaggaacatctttcaaacctgtactg
aatgacccatcagtgaacccctcaagtgtccagcgggtgctgctctgctctggcaaacac
tactatgccctgctgaagcagcgggagtcgctgccagcagcagcccagaacacggcactg
atccgtgtggaggagctctgccccttccccttggaggctctacagaaggagctctccaaa
tacaccaatgccaaagagttcatatggagtcaggaggaaccccagaacatgggtgcctgg
tcctttgtggccccaagatttgaaaagcaactggcatgcaagctgcgactggttagccga
ccacctctacctgctccagcagtgggcatcggcatgctgcacggtcaacagcaggaggct
attctcacagcctccttcagctaa
DBGET
integrated database retrieval system
