Clupea harengus (Atlantic herring): 105913453
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Entry
105913453 CDS
T09045
Symbol
pus7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X2
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105913453 (pus7)
Enzymes [BR:
char01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
105913453 (pus7)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105913453 (pus7)
Prokaryotic type
105913453 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
105913453
NCBI-ProteinID:
XP_012697979
Ensembl:
ENSCHAG00000021961
UniProt:
A0A6P3WFZ7
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All DBs
Position
3:complement(22346799..22357803)
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AA seq
699 aa
AA seq
DB search
MLPFRLTQHLLTTYRGIRAVRFYICVGSKSRTVWPFVGAIQRLVTWNQSPCSIPQVSKLK
TYCSLFMEDSEPTLLKRACPSEEPIHTSKRPRVNDKNGAPASELAKEEVEECEDEGNEDE
LPEEEEEVDGSGETFADMMKHGLTELDVGILKFVSDHKGFSGILKERYSDFVVHEINKEG
KTVQLDDLSLPVEPEEVTPEELPVEAKVLTEEQKKELEELQLFKNKEGSVSIEVVDDTKE
KRTQVHRAVKNFYPGLETKTEEREGRKFIVAYHAAGKKALAAPRKHSWPKNRGAFCHFVL
YKENKDTMDAINVLSKFLRMRPNVFSYMGTKDKRAITVQEIAVLKITAERIIHLNKCLMN
LKLGNFTYKKHPLKLGELRGNHFTVVLRNINGSVEQVQQAMSSLGETGFINYYGMQRFGT
TAVPTHQIGKAILQNNWTEVVDLILKPRPGAEKSYLVRCREEWAKSQDPEAALKKLPVKR
CVEGQLLRGLSKYGMKNIVHAFGMIPRNNRLMYIHSYQSFLWNTLVSRRVEAFGFKAVEG
DLVLRGGTAHVLTAEEVEKHSIHDIVMPLPGFDVIYPTHHVGKGYREIMTADDLDIDNMR
HRIRDYSLAGAYRLILIRPQHVSWEIIHYDDACVPLVHTDVEKLESKPAPVYLTEGKYRA
LRMEFSLPPSTYATMAIREVLKMDTSIKNQTQLNTRWLN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgttaccattccgtctcactcagcatctcctgacaacatatcgtggaattagggcagtt
cgtttttacatctgtgttggatcgaagtcgcgcactgtctggcctttcgttggtgccatc
caaagactagttacctggaaccagtcaccttgtagtattccacaggtgtcaaagttaaaa
acctactgttcactcttcatggaggactccgagcccacgctactgaagagggcttgccct
agtgaagagcctatccataccagcaagaggcccagagtgaacgacaagaatggagccccc
gcttcagagctggcaaaagaggaagtagaggagtgtgaggatgaaggcaatgaagacgaa
ttgcctgaagaagaggaggaggtggatggaagtggcgagacctttgctgacatgatgaag
catggacttacagagcttgatgtgggcatcctgaagtttgtcagcgaccataagggcttc
tcagggattctgaaagaacgatactctgactttgtggtgcatgaaatcaacaaagagggg
aagactgttcagctagatgacttatctcttccagtggaacctgaggaagttacaccggag
gagctgccagtcgaagccaaggtgctgactgaagaacagaaaaaggaactggaggagctc
cagcttttcaagaataaagaaggcagtgtgtctatagaggtagttgatgacaccaaagag
aagcgcactcaggtccacagagcggtgaagaatttctaccctggcctcgaaaccaaaact
gaggagagggagggacggaagttcattgtggcttaccacgcagcgggaaagaaagccctt
gcagcacccagaaaacactcatggcccaagaacagaggcgccttctgccactttgtgcta
tacaaggagaacaaagacaccatggatgctattaatgtcctctccaagtttctcaggatg
aggcctaatgtgttctcatacatgggcactaaggacaagagagccatcacggtacaggag
atagccgttttaaagatcacagcagagagaataattcatctcaacaagtgcctcatgaac
ttgaagctggggaattttacatacaagaagcatcctctcaagctgggagaacttcggggc
aaccacttcaccgtggtcctcaggaacatcaatggttcagtggagcaggtccagcaggcc
atgtcctcgctcggggaaaccggcttcatcaactactatggcatgcagcgcttcggcacg
acggcggttcccacacaccagattggcaaagccattctacagaacaactggactgaagtc
gtggacctcattcttaaaccacggccaggagcggagaagagttacctggtgcggtgccgt
gaggagtgggccaagtcccaggacccagaggctgctctgaagaagctgcctgtcaaacgc
tgcgtggagggacaactgctgcgagggctgtccaagtacggcatgaaaaacattgtccat
gcttttggaatgattccccgtaacaatcggctgatgtatatccacagctatcagagcttt
ctgtggaacaccctggtgagcaggcgggtggaggcctttgggtttaaggctgtggagggg
gacctggtgctcagaggggggactgctcatgttctcacagcagaggaagtggagaagcac
tccattcatgatattgtgatgccccttccaggctttgatgtcatttacccaacacaccat
gttgggaagggctacagagagattatgaccgcagatgacttggacattgacaacatgagg
cacaggattcgggactattcacttgcgggggcctatcgcctcattctcattcgcccacaa
catgtcagctgggaaattatacactatgatgatgcatgcgtcccactggttcacactgat
gttgagaaactagagagcaaaccagccccggtctacctcacagaggggaagtacagggcc
ttgaggatggagttctctcttcctccctcgacctatgccaccatggccatcagagaggtg
ctgaaaatggacaccagcatcaagaaccagacacagctgaacacaagatggctgaactga
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