Clupea harengus (Atlantic herring): 116219108
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Entry
116219108 CDS
T09045
Name
(RefSeq) claudin-9-like
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecule (CAM) interaction
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116219108
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116219108
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116219108
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116219108
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
116219108
04147 Exosome [BR:
char04147
]
116219108
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
116219108
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116219108
Exosomal proteins of colorectal cancer cells
116219108
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Motif
Other DBs
NCBI-GeneID:
116219108
NCBI-ProteinID:
XP_031417921
Ensembl:
ENSCHAG00000004009
UniProt:
A0A6P8F105
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All DBs
Position
24:16032130..16032971
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AA seq
208 aa
AA seq
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MATTGLQVLGVLLAVAGWVGGALVTAAPFWRVSAFVGGELVVAEAQWEGLWMSCLVRSST
GHTQCKTFDSGLALAPGTQARRALAIVALLLGLRGLGLAVLCTHCLGGAHDAKARLARAG
GLVFVAVALTFLVPVSWTAHMVVRDFYDPAVAVMLVGGALINAGSAPPPEGGGGGGGGGR
SSVAGAFGGGKGNPQPTPPAGKKEKAYV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacgggcctccaggtgctgggcgtgctcctggccgtggcgggctgggtgggc
ggggccctggtgaccgccgcccccttctggcgcgtgtcggcgttcgtgggcggggagctg
gtggtggcggaggcccagtgggagggcctgtggatgagctgcctggtgcgctccagcacc
ggacacacccagtgcaagaccttcgactcgggcctggcgctcgccccaggcacccaggcg
cgccgcgccctggccatcgtcgcccttctcctgggcctgcgggggctgggcctcgccgtg
ctgtgcacccactgcctgggcggcgcccacgacgccaaggcgcggctggcgcgggcgggc
gggttggtgttcgtggcggtggcgctgacgttcctggtgcccgtgagctggacggcgcac
atggtggtgagggacttctacgacccggcggtggcggtcatgctggtgggaggggctctg
atcaatgcgggctccgccccgccgcccgaaggaggaggaggaggaggaggaggaggacgg
tcctcggtggcaggcgccttcgggggagggaagggcaacccgcagcccactcctccagcg
gggaagaaggagaaagcgtacgtctga
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integrated database retrieval system