KEGG   Clupea harengus (Atlantic herring): 116219141
Entry
116219141         CDS       T09045                                 
Symbol
pin1
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
  KO
K09578  peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03250  Viral life cycle - HIV-1
char04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116219141 (pin1)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    116219141 (pin1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:char03021]
    116219141 (pin1)
   03110 Chaperones and folding catalysts [BR:char03110]
    116219141 (pin1)
Enzymes [BR:char01000]
 5. Isomerases
  5.2  cis-trans-Isomerases
   5.2.1  cis-trans Isomerases (only sub-subclass identified to date)
    5.2.1.8  peptidylprolyl isomerase
     116219141 (pin1)
Transcription machinery [BR:char03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     116219141 (pin1)
Chaperones and folding catalysts [BR:char03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Parvulin
    116219141 (pin1)
SSDB
Motif
Pfam: Rotamase Rotamase_3 WW Rotamase_2 WW_TCERG1 BTV_NS2 X8
Other DBs
NCBI-GeneID: 116219141
NCBI-ProteinID: XP_031417986
Ensembl: ENSCHAG00000004216
UniProt: A0A6P8F170
LinkDB
Position
24:19822652..19826528
AA seq 158 aa
MADDEKLPSGWEKRMSRSSNRVYYFNHITNASQWERPVGSGDGRGDPDKVRCSHLLVKHN
QSRRPASWREENITRSKEEALEFIQKYIEKIKSGEEKFETLASQFSDCSSARNGGDLGLF
GRGQMQKPFEDASFALKVGDMSGPVFTDSGVHIILRTG
NT seq 477 nt   +upstreamnt  +downstreamnt
atggcagacgatgagaaattaccgtccggatgggaaaagcgaatgagtcgcagttcaaac
agggtatactacttcaaccacataaccaatgccagtcagtgggaacggccggttggctcc
ggtgacggtcgaggcgaccccgacaaagtgcgctgctctcacctgctggtgaagcacaac
cagtcgagacggccggcgtcatggcgagaggagaacatcacccggagcaaggaagaagca
ttggagttcattcagaaatacatagagaagatcaagtcaggcgaggagaagtttgagact
ctggcctctcagttcagtgactgcagctctgcccgaaatggaggagacctaggcttgttt
ggccgaggtcagatgcagaagccattcgaggatgcttcgttcgctcttaaagtgggagac
atgagtggtcctgtgttcactgactccggtgttcacatcatcctgcggactggttga

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