Clupea harengus (Atlantic herring): 116219353
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Entry
116219353 CDS
T09045
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
char04210
Apoptosis
char04217
Necroptosis
char04218
Cellular senescence
char04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116219353
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
116219353
04217 Necroptosis
116219353
04218 Cellular senescence
116219353
09144 Cellular community - eukaryotes
04510 Focal adhesion
116219353
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
116219353
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
116219353
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C2: calpain family
116219353
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GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Motif
Other DBs
NCBI-GeneID:
116219353
NCBI-ProteinID:
XP_031418486
UniProt:
A0A6P8F2U4
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Position
24:12142544..12160379
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AA seq
517 aa
AA seq
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MSNIVHHLAHRKDREEGSGTNAKAIPFNQQDFRTLREQAVWRRALQSGALFCDLTFPAEA
ESLGYNELGRYSSKTRGVEWKRPTEICRNPQFNVGGAAKRIDICQGDLGDCWLLAAIASL
TLDKDILARVVPKDQSFQVNYAGIFHFQFWRYGEWVDVVIDDRLPVRDGKLLFVHSAEGD
FWSALLEKAYAKVSGCYESLNRGNTMEGFEDFTGGIAEKFDLSKDPPFLYKIMKKALGLG
SLLGCSIYSDPDTEAKTTMNLWKGHAYSVTAAEVEHLHESPVQLVRIRNPWGHTEWTGAW
SSKSSKWDDVRPEEAKLNVTADNGEFWMAYSDFTCQFSRLEICNLTPDALTSDEVGRWNH
YQFEGTWEVGSTAGGCKNYTATFCSNPQFFIHLKEVDDDPHDEEDGCSFLVGLMQKDMRR
EKMSGHDFNTIGYAIYQVPDKYKGRSNIHLGPDVLLQQRPVAETRIFKKRRERSCRYKLL
PGEYVIVPSTREPHCKGSFVLRVFSEKHAATRWSQRS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacatagtccatcacctagcccacaggaaggacagggaggaaggctccggcact
aatgccaaggccatcccctttaaccagcaggactttaggaccctgagggaacaggccgtg
tggagacgggccctgcagagtggggccctgttctgcgacctgaccttcccggcggaggcc
gagtctctgggctacaacgagctggggcgctactcctccaagacacggggcgtcgagtgg
aagaggcccacggagatctgcagaaatccgcagtttaatgtgggaggagccgccaaaagg
attgacatctgccagggagatctgggtgactgctggttgctggcggcgattgcctccctg
actctggataaggacatcctggcccgcgtggttcctaaggatcagagtttccaggtcaac
tacgccggcatctttcacttccagttctggcggtatggcgagtgggtggatgttgtcatt
gacgaccggttaccagtgagggacgggaaactgctgtttgtgcactcagctgagggcgac
ttctggagcgccctactggagaaggcctacgctaaggtgagcggttgctatgagtccctg
aatagaggcaacaccatggagggctttgaggacttcaccgggggcatcgctgagaagttc
gacctgtccaaggatcctccgttcctgtacaagatcatgaagaaggccctcggcctcggc
tctctgctgggatgctccatatactccgaccctgacaccgaagcaaagactaccatgaac
ctgtggaagggacacgcctactcagtgacggcagcagaggtggagcacctgcacgagagt
cctgttcagctggtgcggatcaggaacccatgggggcatacggagtggactggagcctgg
agtagcaaatcaagcaaatgggacgacgtgaggccggaggaggccaagctgaatgtcacc
gctgataatggggagttctggatggcctactctgacttcacctgtcagttctctcgcctg
gagatctgtaacctgaccccagatgctttgaccagtgatgaggtgggccgctggaaccac
taccagtttgaaggcacatgggaagtaggatccactgccggagggtgcaagaattacaca
gccacgttctgctccaaccctcagttcttcatccatctgaaggaggtggatgacgacccc
catgacgaggaggatggctgcagcttcctggtcgggctcatgcagaaggacatgcgccga
gagaagatgtctggacacgacttcaacaccatcggctatgccatctaccaggttcctgat
aagtataagggtcgctccaacatacacctgggtccggacgtgttgctacagcaacgtccg
gtggccgagacccgcatctttaagaaacggcgtgagaggagctgccgctacaagctcctg
cccggcgaatacgtcatcgtcccgtccacccgcgagccgcactgcaagggcagcttcgtg
ttgcgtgtcttctccgagaagcatgccgccaccaggtggtcgcagaggtcatag
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