Clupea harengus (Atlantic herring): 116219619
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Entry
116219619 CDS
T09045
Name
(RefSeq) macrophage mannose receptor 1-like
KO
K06560
mannose receptor, C type
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116219619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
116219619
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
char04054
]
116219619
04090 CD molecules [BR:
char04090
]
116219619
04091 Lectins [BR:
char04091
]
116219619
Membrane trafficking [BR:
char04131
]
Endocytosis
Phagocytosis
C-lectin receptors
116219619
Pattern recognition receptors [BR:
char04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
116219619
CD molecules [BR:
char04090
]
Proteins
116219619
Lectins [BR:
char04091
]
C-Type lectins
Others
116219619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
fn2
CysR_MRC2_N
UL45
Ricin_B_lectin
Chordopox_A33R
Motif
Other DBs
NCBI-GeneID:
116219619
NCBI-ProteinID:
XP_031419073
Ensembl:
ENSCHAG00000023123
UniProt:
A0A6P8ESC0
LinkDB
All DBs
Position
25:7274878..7292019
Genome browser
AA seq
1405 aa
AA seq
DB search
MRTTPLGIVLVILHVTLCSSQSESNFLMYDKNVNKCLKGYQPLKLFYCDSNQLSQQFRWT
SNDRILNVHLKKCLGAGSTADGSGLQWLICDDTSQLQKWECKNDTLLNLKGTNLFLSQDE
NSILKLTQDIGAASQWLTHGTTEGLCSRPYQELYTIGGNAFGRPCHFPFQYKGIWYSDCS
LLESDEPWCSPDRDYQDMWGFCPTKSTENKLWKKNQLTGVFYQLNVGSALTWHQARRSCQ
QQDSDLLSITEPQEQSYLSGITTGTQTTFWIGLNQLDSESGWQWADGHPLRYLRWGSGQP
NPALGWFCGSLNTMQSYHWENKLCSKKHGYICQKRTTDAATATPGPPASCSAPWVPYADH
CYFLNRTKKTWKDASIQCMRTGGHLVSVHDVEEQSFVLSQLGYMETDKLWVGLNDQKTQL
LFEWSDQSPVTFTTWDTQEPSHHRTEEEDCVLMGGKDGKWSDSNCGENNGFVCKRAGDSN
PASGSKTENTGCKAAWTRYGYNCYLVGSTTKTFDEAKKSCQESGAHLIDIPNRVENAFLI
SLVGARPEKHFWIGLSNQRDSYTFEWTNTPMVPYTHWNARMPGQNQGCVAMTTGTLAGLW
DVLSCSNKEKYICRQQAEGVVTTPAPPTSPPPSCAEGWNPLGARPFCYKLFLMRSKEERT
WFEALHFCRSIGGDLMSIHSHLDDPKTRYHFHSAWIGYSAQDPNVGYTWSDGSSSSYTKW
MSGEPNNRNNMENCAGISSQDTIDWNDFACEKKMDFYCEIRKGVTPGVPNATIPQYNVTE
DGWIEYSGHQYYISDRAMQMEDARKFCKKGHGDLVVINSEAERLFLWKQTQTEDDDFYIG
LRIDLDKNTEWMDGTPVAFEGWDEDQPLFVVNDETCVKMSNSFGLWFVTNCGRRHEFICE
RHEAPAVNATLAPTEVSKGGCAPDWTKYKQHCYKTQFEKKNWTDAMSFCKAVGGNLVSVL
SKDEQAFLTTMTADAQQHLWIGLHRLTDWSPVWSEGKMLTFRNFLKSHSWTWEGECFAMI
TNSRTSVGKWTTYECSQNMGFICKRPTDNQIIPQTTVLPLSYVEFGNDSLKVEPNNATWW
EAKRRCEADGAQLASIRDGITQAYIELQINKLKQPVWIGLNKNETDGYFRWIDHWRLNRE
NWKYSEPKSQFPCVYVDLTGGWQTAPCNLSLPSVCKHSTDIAPTPHPQYPGLCPESWLPF
KGHCYFLSSKEKGWPEASTACTILGASLLSIESSEEAKFINSLLEMVQDTYEAVWMGLYR
NLKGQWHWLDRSVVDYTNWAEGQPREGSHVLIYAVISTSDLKWRSAWKYPYYPYICKKPK
DPLPTVSTHEIPVLEVHRLYTGLVVAIMIAFTVMGFAAFFYYKGRKPVLPRMPAFENPLY
FKSSKQDIPDDKNLIDNIEIDPCAS
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaacgccactggggattgttctggtcatccttcatgtcacattgtgttccagc
caatcagagagcaattttttgatgtatgacaagaatgtaaacaaatgcctaaaaggctac
cagcctctgaagctgttctactgtgattccaaccaactgagccagcagttccgctggaca
tccaacgaccgcatccttaatgttcatctgaagaagtgcctgggagctgggagcacagca
gatggttctggcctacagtggctcatttgtgatgacacaagtcaactccaaaagtgggaa
tgcaagaatgacacgctgttaaatctgaaggggacaaatcttttcttatcccaagatgaa
aacagcatcctgaaactcacccaagacattggagctgctagtcagtggctaacacatggc
actacagaggggctttgctcacggccataccaagaactgtacacaatcggaggcaatgcc
tttggtcgcccatgccattttcccttccagtacaaggggatatggtactcagactgttcg
ctcttggaatcagatgagccgtggtgttcaccggacagagactaccaggacatgtggggc
ttctgccctactaaatcaactgaaaataagctctggaagaagaatcaactgacaggcgtc
ttttaccagttgaatgtcggctctgcactgacttggcaccaagctaggaggagctgccag
cagcaggattcagacctgctgagtatcactgagccccaggagcaaagctacctatcaggg
atcacaactggaactcaaactactttttggattgggctaaaccaactagacagtgagagc
ggatggcagtgggcagatggacatccacttcgttacttgagatggggatcaggccagcca
aacccagccctaggatggttctgtggttccttaaacactatgcagtcttatcactgggaa
aacaagttgtgctcaaaaaagcacggatatatctgccagaaaaggaccacagatgctgct
actgctactccaggtccaccagcttcttgcagtgctccatgggtgccatacgcagatcac
tgctattttttgaatcgtacaaagaagacatggaaggatgccagcattcagtgtatgagg
actggaggacacttagtgagcgttcatgacgtagaggagcaaagctttgtcctctcacag
ctgggatacatggagacagataagctgtgggtcggtctgaatgaccaaaagacacaacta
ctgtttgagtggagcgatcagtctcccgtcaccttcaccacgtgggacacccaggagcca
tctcaccaccgcacggaagaggaggactgtgtcctgatgggggggaaagatggaaagtgg
tccgattcaaactgtggagaaaataatgggttcgtctgtaaaagggctggggactccaac
cctgcctctggatccaagactgagaacactggctgcaaagctgcatggaccaggtatggc
tacaactgctacttagttggatcaacaacaaagacatttgatgaggcaaaaaagagttgc
caagaaagtggcgcccacttgattgatataccaaacagggtggagaatgccttcctcatc
agtctggtgggagccagaccagagaaacacttctggattgggctgtctaaccaaagagac
agttacacatttgaatggaccaacacgccgatggtcccctacactcactggaatgctcgt
atgccagggcaaaaccagggttgtgtcgccatgacaactgggactttggcaggactgtgg
gatgtgctgagctgctccaacaaggagaaatacatctgcagacagcaggctgagggagtg
gtgactaccccagccccacctacctcacctcctcccagctgtgcagaaggctggaatccc
ctgggagctcgacccttctgttacaagctctttctcatgagatctaaagaagagaggacc
tggtttgaagctttacatttctgtagatccattggaggggatctgatgagtattcatagt
catctggacgatcccaaaactcgatatcactttcattctgcatggattggttacagtgct
caggatcctaatgttggctacacatggtctgatggctcgtcgtcctcctacacaaagtgg
atgagtggagaaccaaataacagaaacaatatggagaactgtgctgggattagttcacaa
gacacgattgattggaatgattttgcctgtgaaaagaaaatggatttctattgtgagata
cgtaaaggagtaacccctggggtacccaacgctaccattccacaatataatgtcacagaa
gatggatggatagaatacagcggtcatcagtattatatcagtgaccgcgcaatgcaaatg
gaagatgctagaaaattttgcaaaaagggacatggggaccttgttgtaatcaacagtgaa
gcagaaaggttatttctgtggaaacagacacaaacggaagatgatgacttttacatcgga
ttaaggatagatctggataaaaacacagagtggatggatgggactccagtggcttttgaa
ggttgggatgaagaccaaccactctttgtggtcaatgatgagacctgtgtgaaaatgagt
aattcttttggtctctggtttgtcacaaattgtgggagacgtcatgaattcatctgtgag
cgtcatgaagctcctgctgtaaatgctactctggctcctactgaggtctctaagggaggc
tgcgctcctgactggacgaagtacaaacaacactgctacaagactcagtttgagaagaaa
aactggacggatgcaatgtcattctgcaaagcagtgggtggaaatctggtatcagttcta
agcaaagatgaacaagcatttctgacaaccatgaccgcagatgcccaacaacatttgtgg
attggcttgcaccgcctcacagattggagccctgtgtggagtgaaggaaaaatgctcaca
ttcagaaacttcctaaagagtcattcttggacttgggaaggtgaatgttttgcaatgatt
accaactccagaacttctgttggaaagtggacgacctacgaatgctctcaaaatatggga
tttatctgcaaacgacccaccgataatcaaatcatcccacagacaacagtgctccccctg
tcatacgtggagtttgggaatgactccttaaaggtggagccaaacaatgcgacctggtgg
gaggccaagagaaggtgtgaggcagacggagcccagctggccagcattcgtgatggcatc
acccaggcctacatagagctgcagatcaacaaactcaagcaacccgtgtggattggactc
aataaaaatgagactgatggttactttagatggattgatcattggcggctgaacagggag
aactggaaatattcagaacccaaaagccaatttccttgtgtctatgtggatctgactgga
ggctggcaaactgctccatgcaatctttcccttcccagtgtgtgcaagcactcaacggac
attgctccaacgcctcaccctcagtatcctggtctgtgtccagagtcatggttgcctttt
aagggccattgctacttcctgtcatctaaagaaaaaggctggccagaagcttctacagcc
tgtactatattgggagcgtctttgctcagcattgaaagttctgaagaggccaagtttata
aacagtcttctggagatggtgcaggacacctatgaagctgtctggatgggcctttacaga
aacctcaaaggtcagtggcactggctggacaggagtgtagtggactataccaactgggct
gaaggtcaaccacgtgaagggagtcatgtcttgatatatgctgtgatctctacatcagac
ttgaaatggaggagtgcttggaagtacccgtactatccatatatctgcaaaaagcccaaa
gatccattgcctacagtgtctacacatgaaatccctgttctggaggttcaccgtttgtat
acagggctggttgttgccattatgattgctttcactgtgatgggattcgctgcttttttc
tactacaaaggccgtaaaccagttctacccagaatgcctgcctttgagaatccattgtac
ttcaagtcctctaagcaagatattcctgatgacaagaatttaatagacaacatagagata
gatccatgtgcatcataa
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