Clupea harengus (Atlantic herring): 116219972
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Entry
116219972 CDS
T09045
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116219972
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
116219972
04147 Exosome [BR:
char04147
]
116219972
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
116219972
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
116219972
Exosomal proteins of other body fluids (saliva and urine)
116219972
Exosomal proteins of colorectal cancer cells
116219972
Exosomal proteins of melanoma cells
116219972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CENP-F_leu_zip
TolA_bind_tri
MqsA_antitoxin
T2SSM_b
Motif
Other DBs
NCBI-GeneID:
116219972
NCBI-ProteinID:
XP_031420335
Ensembl:
ENSCHAG00000011704
UniProt:
A0A6P8F985
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Position
1:complement(2983201..2986781)
Genome browser
AA seq
484 aa
AA seq
DB search
MATTYSSRVSMSSGSSIAGGLSGLSLSGGGARMSVMRAGSVYGGAGGSGVRISSAFGAGG
GGGAGFGFAAGGGGGGGFSMATGGGAFEAVIGNGKFTMQNLNDRLASYLAKVHTLEKANA
ELELKIRQFLAAKIGPASHDFSGFMVTIGDLQARIMAIISVKGGTVLGIDNAKLAADDFR
VKYEAELAMRLSVEADIAGLRRVLDDLTLSKSDLAMQITGIQEEVAYLKKNHQEDLLVLR
AHIGGTVNVEVDAAPQEDLTIVLAGIREHYEAVATKNRKELEVWFQAKSEALSKEVLTST
ATLQTSTSEVTSIRTTAQALQIELQGLFSMKASMEATLAETQTRYAGMLASFQMQVSSLE
EQLGALRGGLEHQGHEYAILLDIKTRLELEIAEYSRLLGGGAYAHSHISSGSTYSASTVS
AAAVSTVIESAVIESAVIESAVIESAAVEAASTTATRTRVVTVVEEVVDGQVVSSSTTSS
IIGS
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaacctactccagccgtgtgtccatgtcctccggatcatccatcgcagggggt
ttgtctgggctctccctgtccggaggtggagctcgcatgagcgtcatgcgggctggtagt
gtctacggcggtgcaggaggatccggagttcgcatctccagcgcttttggagcaggcggt
ggcggtggcgcagggttcgggttcgctgctggcggtggtggtggcggcggtttcagcatg
gccaccggtgggggagctttcgaggccgtcattggcaacgggaaattcaccatgcagaac
ctgaacgaccgtctggcctcctacctggccaaggtgcacaccctggagaaggccaacgcc
gagctggagctgaagatcagacagtttctggcggctaagatcggccctgccagccatgac
ttctctggcttcatggtcaccatcggcgacctccaggccaggattatggccatcatcagt
gttaaaggaggaactgtgttgggtattgacaacgccaaactggctgccgatgacttcaga
gtcaaatatgaggcagagctggccatgcgcctctccgttgaggctgacatcgctggactc
aggagggtgctggatgacctcaccctctccaaatccgacctggccatgcagatcacaggc
atccaggaggaggtcgcctacctgaagaagaaccaccaggaggatctcctggttcttcgg
gcacatatcggcggaacagtaaacgtggaggtggacgctgctcctcaggaggacctcact
atcgtcctggccggcatccgtgagcactacgaggctgtggccaccaagaacagaaaggag
ctggaggtctggttccaggcaaagtccgaagcgctcagcaaagaagtcctgacaagcaca
gccaccctccagacgtccacatcagaagtcacatccatcaggaccactgcacaggcactc
cagatcgagctccaaggccttttcagcatgaaagcgtccatggaagccactctggctgag
acacagacccgttatgctggcatgctggccagcttccagatgcaggtgagcagcttggag
gagcagcttggcgctctccgcggcggccttgagcaccagggccacgaatacgcaatcctg
ctcgacatcaagaccagactggagctggagatcgccgaatacagtagactgctcggcggt
ggcgcatacgctcacagtcacatctcgagcgggtcgacttattcagcgtcgactgtgtca
gcagcggctgtgtcaacagtgattgagtcagcagtgattgagtcagcagtgatcgagtca
gcagtgatcgagtcagcggcagttgaagcagcttccacgaccgccacgcgaaccagagtg
gtcacagtggttgaagaggtggttgatggacaggtggtgtcttcttccactacctcctcc
atcatcggttcctaa
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